Hippocampus comes (tiger tail seahorse): 109523933
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Entry
109523933 CDS
T04969
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109523933 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109523933 (smarcd2)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109523933 (smarcd2)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109523933 (smarcd2)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109523933 (smarcd2)
PBAF complex
109523933 (smarcd2)
GBAF(ncBAF) complex
109523933 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SAM_KSR1_N
ZapB
Spiralin
Motif
Other DBs
NCBI-GeneID:
109523933
NCBI-ProteinID:
XP_019738980
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSTRGSFAGPTMSPSLSPMNVGLAAGLRMPGMPPTAAGYPRSLSGAQQYTQRPGMPLGRV
GGPMGSMGGHLPGPSYGSSSMPMRPTMGPPATLDASRKRLFHHHHQQQQEALGGHRRGYG
LKKAKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQK
RKLRIYISNTYTPCKPEGEETEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKE
LYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDLRLARLLGV
HTQTRASIMQALWLYIKNNKLQDSHEKEYINCNHYFRKIFGCNRMRFSEIPMKLAGLLQH
PDPIVINHMISVDPTDQKKTACYDIDVEVDDPLKSQMSSFLSSTTNQQEITALETKIHET
IEYINQLKTERDFMLSFSNNPQDFIQDWLKSQCRDLKVMTDVTGNPEEERRTEFYQAPWM
PEAVGRYVYSKVQQRRQELEQVLGIRLT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaggggaagcttcgcgggtccgaccatgagccccagcctgagcccgatgaat
gttggactggctgccggcttgaggatgcccgggatgccgccaactgcggcgggatacccc
cgctccttgagcggcgcacagcagtacacgcagcgtcccgggatgccactcggcagagtt
gggggcccaatgggttcgatgggggggcaccttcccggtccctcatacggcagcagcagc
atgcccatgcggcccaccatggggcccccggcaaccttggacgcctcgcggaagcgctta
tttcatcaccaccaccagcagcagcaagaggcgctgggaggccaccggcgcgggtacgga
ctgaagaaggcaaaaagacgcaagatggctgacaaggttctcccgcagagaatccgcgac
ttggtgccagagtctcaggcctacatggacctcttggcctttgagaggaaactggatcag
accatcgcccgtaagcgcatggagatacaggaagctataaagaagcccattatgcaaaag
cgcaagctgaggatctacatttccaacacgtacaccccgtgcaagcccgagggcgaggag
acagagaaggtgtcctcctgggaattgcgagtggagggaaaacttctcgaagaacctggc
aagcagaagaggaagttctcatctttctttaagagcctggtgatcgagctcgataaggag
ctctacggacccgacaaccatttggtggagtggcaccgaatgcccaccactcaggagacg
gacggtttccaggtcaaaaggcccggcgacgtcaacgtcaaatgcacccttctgctcatg
ctcgaccaccagccgccgcagtacaaactggatctgcggctggctcggctgctgggcgtg
cacacgcagacgcgggccagcatcatgcaggctctttggctctacatcaagaacaacaag
ctgcaagacagccatgagaaggagtacatcaactgcaatcactatttcagaaagatattt
ggctgcaatcgcatgaggttctctgagattcccatgaaactggccgggctgctccagcac
cccgaccccatcgtcatcaatcacatgatcagcgtggaccccactgaccagaagaagacg
gcttgctatgacatcgacgtggaggtggacgacccgctcaagagccaaatgagcagcttc
ttgtcatccaccaccaaccagcaggaaatcaccgcattggagaccaagatccacgagacc
atcgagtacatcaaccagctgaagaccgagagagacttcatgttgagcttcagcaataat
cctcaggacttcatccaggactggctcaaatctcaatgccgagatctgaaggtgatgaca
gatgtgaccggaaatccagaagaggagaggaggacggaattctaccaggcaccgtggatg
ccagaagcagtcggcagatacgtgtactccaaagtgcagcagagaagacaagagctggag
caggttcttgggatcaggctcacctga
DBGET
integrated database retrieval system
