Hippocampus comes (tiger tail seahorse): 109524260
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Entry
109524260 CDS
T04969
Symbol
ikbkap
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcq03016
]
109524260 (ikbkap)
Transfer RNA biogenesis [BR:
hcq03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109524260 (ikbkap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_EML_2
B-prop_COPA_B_2nd
Sin3a_C
PhyR_sigma2
Motif
Other DBs
NCBI-GeneID:
109524260
NCBI-ProteinID:
XP_019739539
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MRNLKLLKSLQSSELQGLGSPQCLALRSDAETLLVTSQYSIAEFNPQTEQVISEASLTAD
GYLPADGSGCVVGLQDLAELESACLATAGGDVIVFDFNTSQLECVGSVDSGLTSMSWSPD
EELVILTTGQETIIMMTKNFEPITEFAIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
RKAQDIKPAAQWDDRRPRVTWRGDGQLFAVSAVCPNTGARKVRVWNRECVLQATSEPIDG
LEHPLSWKPSGSLMASTQRHPNKHSVVFLEKNGLLHGEFTLPLRKDQAKVKELLWNNDST
VLAIWLEDLTAGEDGRVNTCVQLWTVANYHWYLKQSLDFGTDPSHAPECMCWDPERPLRL
HMATRGWIYLAYDWGWTTERSPGTDASDHANVAVIDGDKILVTTFRQSIVPPPMCSFELQ
LSSPVNQVTFLCQPERTNQLAALTANGNITTYDQDSGGEPDKVANEFRTTIRPLVFQRTF
STTIHQEAPLFLRHLLWLEDNLFVAVSKGLVPMSSALILLCPSQDTEANTLSVRCRLEVD
GVVTDVVHCCSTRLVALQLEDGRIRKFLWDCADPSLEDWRDSSGCSVNFPVPCTQMALCS
VDGQECVLGLTDRSHLYAADMELASNVSSFVVCDDFLVVTTHSHTCRCLQLSKLSLKALQ
AALAQDGGQNDETLRRVERGSRVVTVVPQDTRVVLQMPRGNLETVHHRALVLAQLRQWLD
DLRFREAFECMRKLRINLNLIYDHNPKVFLENTHTFLTQLNSINNINLFLTELREEDTTS
SMYPRPGGCPQLQQPPHASGCKKVDVVCDAIRKTMEDTDPNKFCLSILTAHVKKSIPELE
IALQKVHELRVNPPEGDGGVNAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQK
DPKEYLPFLNMLKSLEVNYQRYTIDKHLRRYCKALVHLSNSGDEHFPEVLQLVKEQKLYS
QALRLYSADGAHYKALSRAYAKHLLEQQQAEQAGLMLWRCGELDSALQAFATGASWRNAV
CVAQQIPLSNDRLSLLARELAGKLSGQRRYTEAAMLLDQYAKDCEEAISTLISGAAWEEA
LRLIHMYDRADITETDLKPALVEAASAQTFLVETQAAAFSRHRSRLALVRQHKEDKARRM
GVLDEDGPDCVDAELYSEASSVMSASKYSHSNSRVSSRSSKNRRKAERKELSLKEGNPKE
EKALMYALGEIITSVDKMREEIQALLKALVLFRFDKQADELRLVFQEALHAMEEAIPEVW
SQETHSSHAPLTGPDSTANSIMASFQQQQASLTSQQDVEISTPPTMRTKVKWNLDF
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacttaaagctattgaagagcctgcagagttcggagctccaaggtctggggtcg
ccgcagtgtttggcgctccgcagcgacgccgagacactcctggtcacctcccagtattcc
atagcagagttcaaccctcaaactgaacaggtgataagcgaggcctcgctgacggcggac
ggctacctcccagcagacggcagcggctgcgtggtcgggctgcaagacctggcggagctt
gagtcagcatgtttggccacggctggcggggatgtcatcgtctttgacttcaacaccagc
cagttggagtgcgtcggcagtgtagacagcgggctgacctccatgagctggagtcctgac
gaagagctcgtcattctcacgacaggtcaggaaaccatcatcatgatgaccaaaaacttt
gagcccattaccgagtttgcaattcaccaggatgactttggcgaagggaagttcatcaca
gtgggctggggcaagaaggagacacagttccacggctcagaaggcaaacaggctgcgcag
aggaaggcccaggacatcaagccggcggcacagtgggacgaccgccggcctcgggtgaca
tggcgaggggatggacagctttttgccgtcagtgccgtttgccccaatacgggagcccgc
aaggtccgggtgtggaacagggaatgtgtcctgcaggccaccagcgaacccatcgatggc
ctggagcaccctctctcctggaaaccctccggaagcctgatggcaagcactcagcgccat
ccaaacaagcacagtgtggtctttctggagaagaatggtctgctgcatggagaattcacc
ctgcctctcagaaaagaccaggccaaggtgaaggagcttctgtggaacaatgactccaca
gtcctggctatctggttggaggatttaacagcgggcgaggacggacgcgtcaacacttgt
gtgcagctatggacggtggcaaactaccactggtacctgaagcagagcctggatttcggc
acagacccaagccatgctccggagtgcatgtgctgggaccctgagcggcccctgcggctg
cacatggccacccgcggttggatctacctggcctacgactggggctggacgacggagagg
agcccgggcacagatgcctcggaccatgccaacgtcgctgtgattgacggagacaagatt
ctggtgaccaccttcagacagagcatagttcctccacccatgtgttcatttgagctccag
ctcagctcacctgtcaatcaggttaccttcctatgccagcctgagaggaccaatcagctg
gcggcacttaccgcaaatggaaacatcaccacctacgaccaagattctggaggagaacct
gataaagttgcaaatgaattcagaactacgattcgtcccctggtcttccagagaactttc
agcacgaccattcaccaagaggcgcccctgtttctgcgacatctgctgtggcttgaggac
aatctctttgtggctgtcagcaagggtttggtgcccatgtcctctgccctaatactgctg
tgccccagccaggacacagaagccaatacactctctgtcagatgtcgactagaagtggac
ggcgttgtgaccgacgttgtccactgttgtagcacgcgtttggtggccctacagctagaa
gacggccgcatcaggaagttcctctgggattgtgctgatccttcattggaggattggcgc
gactccagtgggtgcagcgttaacttccccgtaccctgcactcagatggctctctgtagc
gtggatggccaggagtgtgtgctgggcctgacagacagatctcacctgtacgctgctgac
atggagctcgcctccaacgtttcgtccttcgttgtctgtgacgacttcctggtggtcacc
acgcactcgcacacatgtcgctgcctccaactgagcaagctcagccttaaagcgctgcag
gcagccttggcccaggatggcgggcagaacgatgagaccctacgacgggtggagcggggg
tcccgtgtggtcacagtggtgccacaagacacgcgagtggtcttacagatgccacgtggg
aatttggagactgtccaccatcgggctctggtgctggcgcagctcaggcagtggctggat
gatttgaggttcagggaagcttttgagtgtatgaggaagctgcgcataaacctcaacctc
atttatgaccacaacccaaaggtcttcctcgagaacacacacacgttcctcacgcagctc
aactccatcaacaacatcaatctgttcctcacagagctcagggaggaggacaccacgagc
agtatgtatcctcgccccggaggatgcccgcagctccagcagccaccgcacgcctctgga
tgcaagaaggtggacgtggtgtgcgatgctattcgcaaaacaatggaggacacagaccca
aacaagttctgtctctccatcctaacggcgcatgtgaagaagtcaattcctgagctggag
atcgccctgcagaaagtccacgagcttcgagtgaacccccctgaaggagacggtggcgtg
aatgccgaggaggcactgaagtacctcctcttcctcgtcaacgtcaacgacttgtacgaa
cactcgctggggacgtacgacttcgacctggtgcttatggttgccgaaaaatcacagaag
gacccaaaagagtacctccccttcctaaacatgctgaagagcctggaggtcaactaccag
cgctacactatcgacaaacacctgagacgttactgcaaggcgctggtgcacctcagcaac
tctggagatgagcattttccagaagttttacagttggtgaaggagcagaaactttacagc
caagctctgcgtctgtactcggctgacggtgctcactacaaggcactgagccgcgcctat
gccaagcacctactagaacagcagcaggcagagcaggctggcctgatgctgtggagatgt
ggcgagctcgacagcgccctgcaggccttcgccaccggcgccagctggagaaatgctgtc
tgtgtggcgcagcagatcccactgtccaacgacaggctttccctgctggcccgagaactg
gcaggaaagctgagcggacagcgacgctacacggaagcagccatgttgctggaccagtac
gccaaagactgtgaggaggccatctcgacgctgatttccggtgcagcctgggaggaagcg
ctacgactgattcacatgtacgacagagcggacatcacagagacagacctgaaacccgcc
ctggttgaagctgcctcagcacagactttcctggtggagacgcaggcggccgccttctcg
cgccaccgctcgcgcttggcgctggtacggcagcacaaagaggacaaagcccggcggatg
ggcgtgctggatgaggacggtcctgactgtgtggacgctgaactttactccgaggccagc
agcgtcatgagcgcgtccaagtactcgcacagcaactcgcgtgtctcctcgaggtcttcc
aaaaaccgccgcaaggctgagagaaaggagctgagtctgaaggaaggaaatcccaaggaa
gaaaaagcgctcatgtacgccctaggagagatcatcaccagcgtggacaaaatgagagag
gagattcaggcgctgctcaaggctctcgtgctcttccgcttcgacaagcaagccgatgag
ctgcggctcgtctttcaagaagcgctgcatgccatggaggaggccatcccggaagtgtgg
tctcaggaaacgcacagcagccacgcaccgcttacgggacccgactcaacggccaacagc
atcatggcttccttccagcaacagcaggcttcgctaacatcgcaacaagatgtcgagatc
tctactccgcctaccatgagaaccaaagtcaagtggaatctggacttttga
DBGET
integrated database retrieval system