Hippocampus comes (tiger tail seahorse): 109525489
Help
Entry
109525489 CDS
T04969
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109525489 (vps53)
Membrane trafficking [BR:
hcq04131
]
Protein recycling
Others
EARP complex
109525489 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
109525489 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Syndetin_C
VPS51_Exo84_N
COG3_N
NBD94
Sec8_N
Laminin_II
COG5_N
FUSC
Snf7
Motif
Other DBs
NCBI-GeneID:
109525489
NCBI-ProteinID:
XP_019741581
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MMEEEEFEFADDLEAILHLTPEVQLAIEQVFPSQDPLDKADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQVAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVKVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVVNVLDPRIKLEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRVELSKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDAPVQKRPESPLEPSNPFLEDDQGEDEGSEKDGKDGDLAKPRKPKAPENPFH
GIVSKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKVATDEGGAVLPSCADLFVYY
KKCMVQCSQLSTGEPMIALTTIFQKFLREYAWKILTGNLPKSSSNSGVLTISSLLKEKEA
SETAKFTLDELCLICSILSTAEYCLATTQQLEEKLKEKVDKILVERINLTGEMDTFSTVI
SNSIQLLVQDLDAACDPALTAMSKMPWQNVEHVGDQSPYVTSIIMHIKQNVPIIRDNLAS
TRKYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVL
RKAPASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGL
KRGEQSSMLELFRQRLPTPPSGADGSTSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaatttgccgatgatttggaggcaattttgcatctcaca
ccagaggtccagctggcgattgaacaggtatttccaagtcaagatccgcttgataaagca
gacttcaatgcggtggaatatatcaacacattgtttccgaccgagcagtcccttgctaat
attgatgatgtggtaaacaagatacgtctgaaaatcaggcgccttgatgacaacatcagg
acagtggtgaggggtcaaaccaatgtggggcaggatgggaggcaggctttagaagaggcc
caagtagcaattcagcagctctttggaaaaatcaaagatatcaaggacaaggcagagaag
tctgaacaaatggtcaaggagattaccagggacataaagcagttggaccatgccaagcgc
catcttactacatctatcaccacactgaaccacctgcatatgttagcaggaggcgtggac
tctttagaggccatgacgagaaaaaggcagtacggtgaggtggccaatctcctgcaagga
gttgtaaaagtacttgagcacttccacaagtatatgggcatacctcagatcagacagctc
tctgagagagtgaaagcagcacaaagtgagttgggcactcagatactggcagattttgaa
gaagcattcccatcccagggctccaagaggcccggtgggccaagtaatgtgttgagggat
gcctgtctggttgtaaatgttcttgatccacgcatcaaactcgagataattaaaaagttc
atccggcagcatctctcagagtaccttgtgctctttcaagaaaaccaagatgttgcatgg
ctagacaagattgatcgccgctatgcttggatcaagcggcaactagtcgactatgaagaa
aaatatggacgcatgtttccagaggagtggtgcatgacagagcgtattgcagtggaattc
tgccacatcaccagagtggagctttccaaagtaatgagaacacgagccaaggagattgaa
gtgaaactgcttctgtttgccattcagaggacgacaaactttgaaggtctgctggcaaaa
cgtttcacaggatgcacattgactgatgcccctgtgcagaagaggccagagagcccttta
gagccctctaatcctttcttggaagacgatcaaggtgaagatgagggtagtgagaaggat
ggcaaagatggggatcttgcaaagcccagaaaacccaaggctcctgagaatcctttccat
ggcattgtttccaagtgcttcgagcctcatctgtatgtctacatagaatcacaagacaag
aacctaggtgaactgatagacaggtttgtggctgacttccgagcacagggcccacccaag
gttgccaccgatgagggtggtgctgtgctgccaagctgtgctgacctctttgtctattac
aagaagtgtatggtccagtgctcccagctgagtactggggagcctatgattgcccttaca
accatcttccagaaattcctacgggagtatgcctggaaaatcctcacaggcaatctgcct
aagtcgagcagtaacagtggggttctgacgatcagcagtctgctgaaagaaaaagaagcc
tcggaaacggccaagttcactcttgatgagctgtgcctcatctgtagcatcctcagcact
gccgagtactgccttgctactacgcaacagcttgaagagaaactaaaagagaaagtggat
aaaatcctggtggaaagaattaatttgactggggagatggatacatttagcacagtgatc
tcgaatagtatccagttacttgttcaagatcttgatgctgcctgtgaccctgctctcact
gcaatgagcaagatgccgtggcagaatgtggagcatgtcggtgaccagagtccctatgtg
acttcaatcatcatgcacataaagcagaatgtgccaatcatcagagacaatttggcctcc
acgcgcaaatacttcacgcaattctgcatcaaattcacaaactctttcattcccaaattt
atcaatcacttgttcagatgtaagcctatcagcatggtgggagcagaacaactccttctg
gacacacactccttgaagaccgtcctgctagacctaccctctataggttcccaggtactt
cgcaaggcacctgcaagctacaccaagattgtggtgaagggcatgacccgtgcagagatg
atacttaaggtggtgatggccccacatgaaccgcctgtggtgtttgtggataactacatc
aagctcttggctgatggcaatcctgagacgttccagaaaatacttgacatgaagggttta
aaacgtggtgagcagagcagcatgctggagctcttcagacagaggttacccacaccaccc
tctggggccgatggcagcacctctttgtctttcagtgcccccacccctgagcaggagtca
tcgcgtatacgcaagctcgaaaaactcatcaagaaaagactgtga
DBGET
integrated database retrieval system
