Hippocampus comes (tiger tail seahorse): 109525700
Help
Entry
109525700 CDS
T04969
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109525700
04091 Lectins [BR:
hcq04091
]
109525700
Ion channels [BR:
hcq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109525700
Lectins [BR:
hcq04091
]
C-Type lectins
Others
109525700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Lectin_C
Ion_trans
GPS
PKD
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
109525700
NCBI-ProteinID:
XP_019742004
LinkDB
All DBs
Position
Unknown
AA seq
2489 aa
AA seq
DB search
MCRCTKMDHTAFAVQTLFFLFLSLTCFVAGEPDAVSCPEYQESFDGSCYEFVGLQRPFLG
AQKWCERGGGHVAFILNNETQKFLQTHLDPKKDWWLGLAPAAPNLTLDTAATQVSLAWLN
GSDVSYNNWASKPDAQATCGHILKKSGFRWAASENCTQELSFICQFESRRSFACDGQNVT
LQCGSGQVIEIDHSFYGRKTIHYCRTKLATTPPPLQEQCTWTDVADSVKGSCHGLQACQA
PADAKSYGEPCPLLGSYLSVEYRCKDGLHLLMSKLAAVFDNVTLNIKWLLQPYEGNLTCA
LNAGDGYTIDSITPEEMETTVMHTFKTPGLFVVTVECSTSDWHVTAQKSISIQEPVGQFG
DIKCYSINTSEGGTNCSLLYIGGPVDVQVTVETGTNVSYVLQHKDLLLANASADRGITPH
NITLNASAVEQLGHGCNNLTLNASNNVTSQIVSTQFELCLLEPVEGLQASVIAEDDRCPD
SSDLIIGVSLERGAPVQLLFTLTVNNVTHLETRNMLNGSLQMYTFGSPVEGSFQLNVQAA
NALSTSDFNVSLESIFLACENHSDSENKMTGKSYDLKVISTPESVVDYTQNVTLSINGSV
SLPSIGLEFKWKCRGDCKCKNQTNDTTHMIDKQCLPNPFEMAVYTVTVKKTAWFRKWVKL
ASASKCITVAQEELKNVSISCDNCTSIDANDPVKLRLSCVASCPDVDWYMEDLKPIKDDL
ETCYSQEGRRPLMKKQEGNSEFLVNSKELKYSRDNLLNITVIVQGKSEQGYARYTLPIPD
PEPTVTPSHPTCSIFPLSGTVLDSFDITCQASSFCSSGCLYCFKTDTGKHLRCNNKEIVK
SILLPVGDEKNNYNLSIVITVKNEYTEVTTMVHTQVRKNNSSGSVDTLQSVLEDTVSQLE
QDGLLSGEALSQIVTSVADMLNTEADEDQKDARTKLREQMLTKMTTVLLDSRSNTSYEVQ
VTARAVAELTQRSDELSPAAQEEASSLLVDLSSSLNIISVNQDGSGDDGEVVDGAAPIVE
AASNILNAPSNEKVSTSLLTGMGNVQNALLNHKKLNGDPIIIDSNQISVYVNRVSPESMQ
MQDINIQRSSASRFSFPTLPSDVFSPDEPVDVRMMSFEKNPYSWKGGNISGTVGSVTLTR
PNGTVIPIKNLPEEIEILLPRLDVGLENSTVLDLANFSTLIIDVPSPDVTLVLKMEPSEN
ITFVLLLGHKNYPTIEHYVAKTQMPLENVKEEEKYTWVLSPKDRTGDAGVHFLVLKPKVE
PGVKSVNATVSIVTIAAQCKYWDEEESSWSEDGCRVGPLTTPLLTQCLCNHLTFFGSSFF
VMPNLVDVSRTAELFSTFFNNPVVVCFVGAIFGAYLLVVVWARRKDIQDSAKVKITVLED
NDPLAEYCYMLTIGTGHRHGASTSSQVTITLLGTEGESEPHHLTDLEKPLFERGAEDVFL
LTTHFSLGELQSVRLWHDNSGAHPAWYVNKVMVQDLESGQKWHFLCNSWLAVDVGECNLD
KVFPVATEEDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFTRVQRVSCCFSLLLCT
MLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTRPREK
SQKSDKTKQGKTVRVSPSQTSSPQKEQKDITPDTVLKDIKRIAQSLSKAMKSPLPYLELR
PGHQTDINTLLSLVEDIIRQQNRISSDFYTDTAKRERSILSLGAVDLQEKSVWGSPERTS
DGVQKKSNNSRYLYRQLRHVEKKLGFLGSSRFQNPDSYNKAMQQVQGMKNLLEFHLPSHS
LDGEQSERSPSPEESANKGTAKRCCQGGLPWWFVFVGWILVIATSGVSGYFTMMYGLTYG
KDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYGEPQIDESLKNYDD
PDGVRAARRDSTCSFYQPPPPTDIEKMRNNMIKEQKVFALIREILAYMGFMWMLLLVAYG
QRDPNAYFLTQHIRQSFSKGISDTMRIQDVYNWANTTLLSNLFGEHPGFITDGNSKLVGN
ARLRQLRVQKNSCRVARRMQHAVHDCHSLYSWESEDMGSYSPGWSSSEPDNTSVNLPSPW
KYQSQGKLRAYPIWGSMILYRGGGFVVDLGPDLENSSRSLQYLYENRWLDAHTQAIFVEF
TVYNANVNLFCIVTLMLETTALGAFQFRSELQNVRLYQSTGGLHIFVMASEAIYFLFILY
YMFVQAKLMKQQRWAYFKSKLNLLELAIILLSWSALSVFIKRTLLGKRDMEYYQNHKDQF
ASFHETAKADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMITATLQRAWTDISGFLVVMT
IMFLAYSIASNLMYGWKLYSYRTLFDAAQTMVSLQLGIFNYDEILNYNPILGAFLIGSCI
VFMTFVVLNLFISVILVAFSQEQIHHKPSEEEEIVDMMMMKLCSLFGIKSKTKQGDDGQT
EKAQLTCASKNEIATISPGRIDKDAYVLL
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggtgcacaaagatggaccatactgcttttgcggtccagactttattttttctc
tttctcagcttgacttgctttgtggccggagaaccagatgctgtctcttgtcccgaatac
caagagagctttgatggctcctgctatgagtttgtgggtctgcagcgtcctttccttggt
gcccagaaatggtgcgagagaggaggaggacatgtagccttcatcttgaacaacgagacg
cagaagttccttcagacgcacctcgatccaaagaaggactggtggctcggactggcgcct
gctgcgccaaacctaactctggacactgctgccacacaggtttctctggcatggctgaat
ggctcagatgtcagctacaataactgggcaagcaagcctgatgcgcaagccacctgtgga
catatcctgaaaaagtcaggcttccgttgggcagcgtcggagaattgtactcaggaactt
agcttcatctgccagtttgaatctaggagatcttttgcatgtgatggccaaaacgtcaca
ttgcagtgtggctctggtcaagtcatagagatagaccatagtttctatggtcgaaaaaca
attcactactgccggaccaaactcgccaccacacctccacctcttcaggagcagtgcact
tggacagatgtagcagactctgtaaaaggaagttgccatggactgcaggcctgccaagca
ccagcagacgccaaatcttacggtgaaccctgtcctctgttaggaagttacttgtctgtg
gaataccgctgcaaagatggtctccacttgctgatgagtaaattggcggcagtgtttgat
aatgtcactctcaatatcaagtggcttcttcaaccttatgagggtaaccttacatgcgcg
ctgaatgctggcgatggctacactattgattccatcaccccagaagaaatggaaaccaca
gtgatgcacacgttcaaaacgcctggacttttcgtggtcacagtagagtgttccaccagc
gactggcatgtgacagctcaaaaatccataagcattcaggagccggtgggtcaatttgga
gatatcaagtgctatagcatcaacacgtcagaaggtggcactaactgcagcctgctctac
atcggagggcctgttgatgttcaggtcacagtggagaccggtacaaacgttagttacgta
ctccaacataaggaccttttacttgcaaacgcctctgctgaccgagggatcacgccccac
aacattacactgaatgcaagtgcagtggagcagctcgggcatggctgtaacaacctgact
ttgaacgcctccaacaacgtcacgagccaaatcgtgtccacccaatttgaactgtgtttg
ctggaacctgtcgagggcctgcaagcctcagtgatagcagaggacgatcggtgtcccgac
tccagtgacctcattattggtgtctcgctggaacgtggagcccctgtgcagcttctcttt
acactgactgtcaataatgtcactcacttggagaccagaaacatgctcaatggaagctta
caaatgtataccttcggcagcccggttgaaggatcatttcaattgaatgtgcaagctgcg
aatgctttgtcaacctctgattttaatgtgagcctagagagcatattcctggcttgcgag
aatcactctgactctgaaaacaagatgactggcaagtcttatgacttgaaagtaatttcc
actccagagtctgtagttgactacactcagaatgtcaccctgagcattaatggaagtgtg
tcattgcccagcataggactcgaatttaagtggaaatgtagaggggactgcaaatgcaaa
aaccaaacaaatgacacaactcacatgattgacaagcagtgccttccgaatccatttgag
atggccgtctacaccgtgactgtcaagaaaacagcctggtttaggaaatgggtcaaacta
gcttctgcttccaagtgtatcactgttgctcaagaggaattaaaaaatgtctccattagt
tgtgataattgcacttcaattgatgcgaacgaccctgtaaaactgaggctgagctgtgta
gcgagttgcccagatgtggactggtacatggaggatctaaaaccaatcaaggatgacctc
gaaacctgttactcacaagaaggaagaaggccgctgatgaagaagcaagaaggcaactca
gaatttcttgtaaacagcaaagagctgaaatattcgagggacaatttgcttaacatcacc
gtgattgttcaagggaaatcggagcaaggttatgccaggtacactctacccataccggat
ccagaaccaactgtcaccccctcacacccgacgtgcagcatctttccattatcaggcact
gtactggactcattcgatatcacctgccaagctagttctttctgttcttcaggctgtctt
tattgcttcaagacagacacaggcaaacatctacgttgcaataataaagaaattgtgaaa
tctatcttactgcccgttggagatgaaaagaacaactacaatttgtctattgtgataact
gtgaaaaatgaatatacagaagtgaccacgatggtccacactcaggttcggaaaaataac
tccagtggttccgtagacacactccagtcagttctagaagatactgtctcccagttggaa
caagatggtcttctctccggtgaggcccttagccaaatcgttacctctgtagcagatatg
ctcaataccgaggccgatgaggatcagaaggacgcaaggacgaagctcagagagcagatg
ctgaccaaaatgacaacggtgctgctggactcccgatcaaacaccagttatgaggttcaa
gtgacagctagagccgtagccgaacttacgcagcgatcagatgagctcagtccagctgcc
caggaagaagcaagctcactcttggttgacctgagctcttccctcaacattatcagtgtt
aatcaggatgggagtggtgatgatggagaagttgtggatggagctgcaccaatagttgaa
gctgccagtaatattttgaatgctccgtccaacgaaaaagtttccacttcccttctgact
gggatgggtaacgtacagaatgccttgttgaatcataaaaagttgaatggagatcctatc
atcattgactctaatcagatcagtgtgtatgtaaacagagtgtctccagaaagtatgcaa
atgcaggatataaacatccagaggagcagcgcttctagattttcctttccgacgctccct
tctgatgttttctcaccagatgaacctgtggatgtcagaatgatgagttttgaaaagaac
ccatactcttggaaaggtggaaacatttcaggaactgtgggatctgtcactctcacaaga
ccaaacggcactgtcatccccattaagaatctccctgaagagattgagattctcctgccc
aggctggacgttgggctggagaacagcacagttctggacctggccaatttcagcacatta
ataattgacgttccctcgcctgatgttacactggtgctgaaaatggagccctctgaaaac
attactttcgtcttacttctggggcacaagaattatccaacaattgagcattatgtggcc
aaaactcaaatgcctctcgagaacgtcaaggaagaggaaaaatatacctgggtcctcagt
cctaaagacaggacaggagatgctggtgtgcacttcctcgtcttgaagcccaaagtcgag
ccaggcgtcaaatcagtgaatgccaccgtcagtatcgtaactatcgctgcccagtgcaaa
tactgggatgaagaagagtcgtcttggagtgaagatggctgcagggttggcccactcacg
acacctttgcttactcagtgtctgtgtaatcacttaactttctttggcagctctttcttt
gtcatgccaaacctagtggacgtgtcacgtaccgcggagcttttctccactttctttaac
aatcctgtggttgtgtgttttgtgggggccattttcggcgcttatcttctcgtggttgta
tgggcacgcagaaaagacatccaggactcagctaaggtcaagataacagtgcttgaagat
aacgaccctctggcagaatactgctacatgctgacaatcggcacagggcatcgccatggt
gcgtccacctcctcacaggtgacaataaccctgctgggaacagagggggaaagtgagccc
caccacctgaccgatctcgagaaacctctgtttgaaaggggcgcagaggacgtatttctc
ttgaccacgcacttttcccttggagagctgcaaagcgtcaggctgtggcacgacaactcg
ggcgcgcaccctgcatggtatgtcaacaaagtaatggtgcaagatctggagagtggccag
aagtggcactttctctgtaattcctggcttgctgtggacgtgggagagtgcaacctcgat
aaggttttcccagtggccactgaggaggatctgaagagatttagcaatctgttcttcatg
aagacagctaaggatttccgtgatggacacatctggttctcggtcatcagtcgaccacca
tgcagcaccttcactcgtgtgcagcgagtgtcctgctgcttttctttgttgctctgcacc
atgttgactagcatcatgttttggggcatccccacggacccctcagagcagaccatggac
ctgggtcacatcgaattcacctggcagcaggtcatgattggaattcaaagttcgatcatc
atgtttcctatcaatctcctcattgtgagcatcttccgaaacactcggcctcgagaaaaa
tctcagaaatcggacaagaccaagcaggggaagacagttcgggtatctccctcacagacg
tcttcccctcagaaagaacagaaggacatcacaccagacacggtgctgaaggatataaaa
agaatagcccagtcactttcaaaggccatgaagagtccccttccttatttggagcttcga
cctggtcaccagactgatatcaacacccttttgtctctggtggaagacatcatcaggcag
caaaaccgaatttcctctgacttttacacagataccgccaaaagagaacgctccatcctc
agtttaggggcagtcgatcttcaagaaaagagtgtttggggcagtccagagaggacctca
gacggggttcagaagaagagcaacaacagcaggtacctatacaggcagctgcgtcatgtt
gagaagaagctgggtttcctgggatcctctcgattccaaaacccagacagctacaacaaa
gccatgcagcaagtccaggggatgaagaatctgctcgagtttcacctaccgtcacacagc
ctagatggagaacaatcggagcgtagtcccagtccagaagagagtgccaacaagggcact
gccaagagatgctgccaaggtgggctgccatggtggtttgtctttgtaggttggatattg
gtaatagcaaccagcggtgtgtctggatactttaccatgatgtatggactgacctatggg
aaagatcgttctataagctggctgatctccatggtggtgtccttctttgaaagtttgttc
atcacacaacctctgaaggttcttggctttgctgctttcttcgctcttgttctgaagaag
gtggatcaggaagaatacggagagcctcagattgatgagagcctgaagaattatgatgat
cctgatggggtgcgagcagcacggagagacagcacgtgcagtttctaccagccgccacct
ccaacggacatagagaagatgaggaacaacatgattaaagagcagaaagtctttgctctc
atcagggagattctggcctacatgggattcatgtggatgttgctcctggtggcgtatgga
caaagggatcccaatgcgtacttcctgacccagcacattcgccagagctttagcaaaggc
atctctgacacgatgagaatacaagatgtgtataactgggcaaacacaactctgctcagc
aacttgtttggagaacacccaggttttatcacagatggtaactcaaagctggtgggtaac
gctcgtctccgccagctgagggtacagaaaaactcttgccgcgtggcgcgacgcatgcaa
catgctgtgcatgactgccactctctgtactcgtgggagtccgaggacatgggctcctac
agtccaggctggagttcctctgagcctgataatacatcagtgaacctccccagtccctgg
aagtaccaatcccagggtaaattgagggcctaccccatctggggaagcatgatcctctac
aggggaggaggctttgtggtggatctcggaccagatttagaaaactccagcagatctctc
cagtacctctatgaaaaccgctggttggatgcacacacccaagcaatctttgttgagttc
accgtgtacaatgccaacgtcaacctcttctgtattgtcacactcatgctagagaccaca
gctctaggggctttccagttccgtagtgagctccagaatgttcgtctctaccaatcgacg
ggcggcctgcacatttttgtcatggcctctgaagccatctacttcctcttcattctatat
tacatgtttgttcaggcaaagctgatgaagcaacagagatgggcttatttcaagagtaaa
ttgaatctacttgagctggcgatcatacttctcagttggagcgcattgtccgtctttatc
aagaggactctgctggggaagcgagacatggagtactaccagaatcacaaagaccaattt
gccagtttccacgagacagccaaggctgatgcagtcctgggctatctgattgccttcctg
gtgctgctggccacagtcaagctgtggcacctgctgagactcaaccctaagctgcacatg
atcacagcaacgctccagcgagcctggactgatatctccggcttcctggtggtcatgacc
atcatgtttctggcctactcgattgcttccaatctgatgtatgggtggaagctgtactcc
tatcgcactctatttgatgctgctcagactatggtcagcctgcagctgggcatttttaac
tatgatgagattcttaattacaacccaatcctgggtgccttcctcatcggctcctgtatc
gtgtttatgacgtttgtggtgctcaacctcttcatctctgtcatccttgtggccttcagt
caagaacagattcatcacaagccatccgaggaggaagagattgtggacatgatgatgatg
aaactttgcagtctatttggaatcaaatccaagactaagcaaggtgacgatggccagact
gagaaggcccaacttacgtgtgcttcgaagaatgaaatcgctacaatttcgccagggcgt
attgacaaggacgcttatgttctactttag
DBGET
integrated database retrieval system
