Hippocampus comes (tiger tail seahorse): 109526228
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Entry
109526228 CDS
T04969
Symbol
dhx40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1
KO
K18711
ATP-dependent RNA helicase DHX40 [EC:
5.6.2.6
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109526228 (dhx40)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109526228 (dhx40)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
109526228 (dhx40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
T2SSE
nSTAND3
DUF4685
AAA_30
Flavi_DEAD
DUF3937
Motif
Other DBs
NCBI-GeneID:
109526228
NCBI-ProteinID:
XP_019742940
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MSKSTAKYRKDNQSLQLPIYKHKAKLVQAVKESTFLVVTGETGSGKTTQLPQYLCQAGFC
KNGKICITQPRRVAAITVAQRVAHEMQCTLGREVGYQVRFDDCTTQDTELKYMTDGCLLR
EVLADPGLSHYSVVVLDEVHERSLNTDILLGLLKKVFSNPTEAMKGRAFPLKVVVMSATM
ETDKLSAFLGDCPVFAIPGRTFPVTCTLGTAVGPKDLQSTGYVKEVVSLALDVHTSEKAG
DILVFLTGQLEIERACDLLFEKAESIDYRYDVQDKTVDGLLILPLYGSMPTEQQRQIFQP
PPPGIRKCVVATNIAATSLTINGIKYIIDSGFVKQLNHNSRVGMDILEVVPISKSEALQR
AGRAGRTSAGKCFRIYTKEFWEECMPEYTIPEIQRTSLTAVVLTLKCLGVHDVIRFPYLD
PPEERFILEALKQLYQFDAIDRFGGALFAFLGIVNTTVLAVTRGMLSARRGRVTRLGELM
VEFPLQPGLTRALLKAASHGCQDLLLSVAAMLSVENIFIRPGHPDKQKEADQSHRALAAN
SGGVNDFGTLLSVFQQCKSSERPSAWCKDNWIHWRALKSAFSVETQLRDILLRLQQRRDF
PVEKFDGNKNELFRRCLCTGYFTNVARRSVGKVFCTMDGHGSMVHIHPSSSLFDKEMELD
WILFHDVLVTSRVYVRTVCPIRYEWVKDLLPKLHEVDVYELSSVAREEVTDEEVTKWETR
EAAKRQSEISAEDALKKVEKRNNENSVSEARARYLQRKLQRQQNKVV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatcgacggcgaaataccggaaagacaaccagtcattacagttgccaatctac
aagcataaagctaaactggtacaggctgtgaaggagagcactttcttggtggttaccggt
gagactggcagcgggaaaacgacgcagcttccacagtatttgtgccaagcaggtttttgt
aaaaatggcaaaatttgcatcacccagccccgccgtgtggctgccatcacggtggctcaa
agggttgcccatgagatgcagtgcactctgggaagagaggtgggctaccaggtgcgcttt
gacgactgcacgacgcaggacacggagttgaaatacatgacggatggctgcttgctcaga
gaggtcctggcagaccctggactttctcactacagtgttgtagtcttggatgaggtccac
gaacgaagcctgaacactgatatcctcctgggtttgctgaaaaaagtattttcgaatccg
actgaagctatgaagggccgagctttcccactaaaggtggtggtgatgtccgccaccatg
gaaacagacaaactttccgcctttctaggtgactgcccggtatttgctatccctggaagg
acttttcctgtcacgtgtacgttgggcactgccgtgggacctaaagacctacagagcacg
ggttatgtgaaagaggttgtctctctggctctggatgttcacactagtgagaaggctggc
gacattctggtgtttttaacaggtcagttggagatcgagcgggcgtgcgatttgctgttt
gagaaagcggagtcgatagactaccgctatgatgtacaggacaaaacagtggatggacta
cttattttacccctctatggttccatgccaaccgagcaacagcggcagatcttccagcct
cctcctccgggaataaggaagtgtgtggtggccaccaacatcgctgccacatctctcacc
atcaatggcatcaagtacatcatagacagcggctttgtgaagcaactcaaccataactcc
agggtgggcatggacattttagaagtggtacccatttcaaagagtgaagctctgcagcga
gcaggccgggctggaagaacctcagcggggaagtgtttccgcatctacaccaaggaattc
tgggaggaatgcatgcccgaatatacaattccagagatccagaggacgagtttgactgca
gtggtcctcactctcaagtgcctgggtgtacatgatgtcattaggtttccctatctggac
cctccagaagagaggtttatcctggaggcactgaaacagctctaccagtttgatgctatc
gacaggtttggtggtgcgctctttgcctttttgggtattgttaacacaacagtgctagca
gtcacaaggggcatgttgtctgccaggagaggtcgagtgactcgcctgggggagctaatg
gtggagttccccctgcagcccggcctcaccagggccctgctcaaagctgcctcgcacggc
tgccaggatctgcttctctccgtggccgccatgttgtctgtcgagaacatcttcatccgg
cctggccaccctgacaagcagaaagaggcagatcagagtcacagagcactggcggccaat
agcggcggcgtaaatgacttcggtacacttctgagtgtgtttcagcagtgtaaatccagt
gaaagaccgtcagcgtggtgcaaggataattggatccactggagggcgctcaagtctgcc
tttagtgtcgagactcagctccgtgacattctcctccgtttgcaacaaaggagagatttc
ccagtggagaaattcgatggcaataagaacgaactctttagacggtgtctgtgcacagga
tacttcaccaatgttgccagaagatctgttggaaaggtattttgcacaatggatggtcat
gggtctatggttcacattcatccatcatcatcgttgttcgacaaggagatggagctggat
tggattctctttcacgacgtgttggtgacatcacgggtgtacgtcaggacagtatgtccc
atccgatatgagtgggtgaaagatcttctgcccaaattgcacgaggtggacgtttatgaa
ctaagcagcgtggcgcgagaagaagtcaccgatgaggaggtgaccaagtgggagacgagg
gaggctgccaaaagacaatcagagatttctgctgaggatgccttgaagaaagtggagaag
cgaaacaatgaaaatagcgtcagtgaggcacgcgctcgctatcttcagcggaaactgcaa
agacaacagaataaagttgtttga
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integrated database retrieval system
