Hippocampus comes (tiger tail seahorse): 109526354
Help
Entry
109526354 CDS
T04969
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109526354 (npas1)
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109526354 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
109526354
NCBI-ProteinID:
XP_019743171
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRAFASQGDPPWSPLLEGDSNCSKVRRSSHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQVGPESAPSSSASASSLAGTPEPSAPSSPHSPADEPPDRG
FFIRMKSTLTKRGLHVKSSGYKVIHVTGRIRYRPAIVPGTARSMPRPMGMVALAHTLPPS
TLNEVRMESHMFVFRVNMDLQVTYCENRISDYMDLTPAEVVGRTCYHFIYVEDLENLRQS
HEGLLRKGQVVTGYYRWLQKRGGYLWIQSTATVSINHKAPHERNVIWVNCVLSRTELPDT
PLDLLQLPESVRAERLRVSSPPTNSSPQARGSQPAKSSAGKSDPDTKAREKFTTAAVQSE
NRRKRLVRSEPEGAPPESRRRLDELRHTEESVSASSDLASESEGEDEDEEEDEEPDWEQG
GDGDKLKQEDSGGKPSRGADAPTRGERGGRVHNGRAVIQQLKSVVTPSASIKTEHEALAT
GGRWGSHSSQPQPSHAHTPSSSLNGDSPNTPIPDSSSSSEAPPKGLFTPPSPALSPVMPV
SSPLPREERAAPGAVGRGGGPGGGPDLELLQRLAAGGAAGRVLFHPLALGPQGPQSLYAP
STIRYAPPELPPSHHHGVGHGDGLQLRSDHHKGPPPAFFPHLQRLAGLPPFSGFSPSDSP
FPSGLPFCMNGLRGAAGSEED
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatgccgtttgtcagtgaggggaagtgtgttagcgtggagtgggatttcctg
caaggacttctggccaagcctcctacactgccctgtctgcagaacctacgcaaagagaag
tcgcgcaatgcggcccggtcgagacgcgggaaggagaactttgagttctttgagctggcc
aagatgctgcccctgcccggcgccatcaccagccagctggacaaggcctcggtcatccgg
ctgaccatcagttacctacacatgcgcgcctttgccagccagggggacccgccctggagc
cccctgctggagggagacagcaactgcagcaaagtgagacggtcctcacattctctggcc
actgacatctttgaacagcacctgggggcgcatctcctgcagtctttggacggctttgtg
ttcgtggtcagccaggagggacgttttctttacatctcagagacggtttcgatctacctg
ggactctcgcaggtggagctcacgggcagtagcgtgttcgactacatccacccggccgac
cacgtggaaatggccgagcggctggggatcaggccccacctgcgagcagaggccggctgc
caagtgggcccagagagcgctccctccagctcggcctccgcctcttccctggccggcacg
cccgagcccagcgcgccatccagtcctcactctcccgctgatgaacctcccgaccgcggt
ttcttcattcgtatgaagtccacgctcaccaagagagggctacacgtcaaatcctcggga
tacaaggtgatccacgtgaccgggagaatacgctaccggcccgcaatcgtccccggaaca
gcgcgttcaatgccccggcccatggggatggtggcgctagctcacacactccccccttcc
acgctcaatgaggtccgcatggagagccacatgtttgtcttcagggtcaacatggacctg
caggtcacatactgcgagaacaggatatccgactatatggacctgacgcccgcagaggtg
gtgggacgcacctgttaccacttcatctatgtggaggatctggagaacctgcgacagagc
cacgaaggcttgttgaggaaaggccaggtggtgacggggtactaccgctggctccagaag
agaggcggctacctgtggattcagtccaccgccaccgtgtccataaaccacaaagccccc
cacgagcgcaacgtcatctgggtcaactgcgtcctcagtcgaacggagctgcccgacact
cctctggatctgctgcagctgccagagagcgtcagagccgaacgacttcgagtgagctcc
cctcccacaaacagctccccgcaggcccgaggctcccagccagcaaagagctcagcggga
aagagcgaccccgacacgaaagctcgagagaagttcaccactgccgctgtccaatcagag
aacaggaggaagcgcctggtgaggtccgagcctgagggcgccccccctgagagccgccgc
cgtctggatgagctgaggcacacagaggagagcgtgtcggcctcctcggacctggccagc
gagagcgagggcgaggacgaggacgaggaggaggacgaggagcccgactgggagcagggg
ggggatggtgacaaattgaaacaagaagacagcggagggaagccgagcaggggtgccgac
gccccaacgagaggtgagaggggagggcgggtacacaatgggcgagctgtgatccagcag
ctgaagagcgtggtgaccccgtccgccagcatcaagacggaacacgaggccctggccacc
ggggggcgctggggctcacacagcagccagccgcagccgtctcacgcgcacaccccctcc
agcagcctcaacggcgacagtcccaacaccccgatacccgactcctcgtccagcagtgaa
gcgccgccgaagggcctcttcacccctccctccccggccttgtctcccgtcatgcccgtg
tcttccccactgccacgcgaggagcgggccgccccgggggcggtcggtcggggcggcgga
ccgggcggtggccctgacttagagctcctccagagactcgccgcggggggtgcggcgggg
cgggtactcttccatccccttgccctgggaccacagggcccccagagcctctacgccccc
agcactatccgctacgctccccccgagctgcccccctcccaccaccatggggtcggacac
ggggacggcctgcagttgcgttcggaccaccacaagggacccccgccggccttcttcccc
cacctgcagcgactggcaggcctgccgcccttcagcgggttctccccttcggacagccca
ttcccctccggactgccgttctgtatgaacggattgcggggggccgccggctccgaggag
gactga
DBGET
integrated database retrieval system
