Hippocampus comes (tiger tail seahorse): 109526407
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Entry
109526407 CDS
T04969
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04270
Vascular smooth muscle contraction
hcq04625
C-type lectin receptor signaling pathway
hcq04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109526407 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109526407 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
109526407 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109526407 (arhgef12)
Membrane trafficking [BR:
hcq04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109526407 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
109526407
NCBI-ProteinID:
XP_019743245
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MSDTQSNFTDRCPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVTISSPNSPAA
ERPYSPHDRLTSTPQWAMKEEYGRNTSPKLLKDNQEAKTHIPQLQGQLFKATGATQEAAP
GGEADDGSMFETERTLAAGDQSADLSWSSSTPISGFGLVSPESFCQRQLSGPSPKSTPRN
SFNSCHSPGTEDATDLDSLSPTNVSCPSSRLISHIIGAEDDYFDSDHEQGPFLLQTNGQF
NRFTSIEQLKSRPAHLAAFMHHVISQFDPAPVLCYLYADLYKQTNSKETRRVFMDLHTFF
IDRGAHLKVPVPESISADLDRRRTELIPEEINRQHVQALQDSLLPDIQKNLEDFRQKRSM
GLTVAEVELGRLDQERVRDRVTLERERSYAENIITKIEDILVTAQTTEEEKCTTMQYVIY
TYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKDGEEKVKKPRFPSILGPQRRPSR
IEAASVGKALDGRPKPQKQLSQPSLGASEQTDGGRLRSSQSSEGSELTHPTSLTTSSPNS
TTFSSDASRDTDSGGTPTSGPTRLSDGLQSDPLDGLAYPASHFDLYSLDQLQEDDRETDR
THEGTPKAIRRLEGLGPIDVQSEDDQGTDSEHDPLNWQQLVGREVLAGLRPLEIKRQEVI
NELFYTERAHVRMLRVLDHVFYQKLSKDAILPPVDIKNIFANLEEILQLHVSIMDQMAAV
RKRNESSVIDQIGDDLLSWFSGGEEEKIKQAVGTFCSNQPFALEIIKTKQKKDSRFISFI
QEAQSNQLCRRLQLKDIIPVEMLRFTKYPLLLDNISKYTDDAVEKDKVKQAADCCRKILN
HVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLDLTKKTMVHEGPLSWKVNK
DKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKHIFSPIIKLNTVLVRSVAT
DNKSFFVLSMSDNGAQIYELMASTVSDQRTWQNLITQRAEAMKVKPHSVIPLPQTDGERD
GVEIITDGVSRLSKDPDRTSTGSTQSTDKESSPAVRRVAPSPLPANNPFEAGNEDEEVEE
GFVDPELPYRGTEDGSTDSFNVFPSRADEALKTLSALKQVLVTQLMSQEAVERTKRSTGA
RLLRTTSLRTPIEKRVMVHNGSERNNSQTEDPTQDLGSGDTGFFDSPEDYAGFLVLEGYG
GPGESNTDDDMSPAGKQLSASQGCAADSGINLRFSSASYAGSLSSFSRQVLSHLRNLQAN
LNHLKEVEAKYNNLRQRPERSTTHSDGNKEKR
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccaacttcactgacaggtgtcccaagaaagcaaaccgaaccagc
agcattctcagtaaagaccaccccccggacaagaaacctaaaagtgacaaaacctcactt
ccctctaatgagtttgacccgacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtcatcattcag
aaagatgaaaatggttttgggctcacagtcagtggggacaatccggtgtttgtgcagctc
gtcaaagaagatggcgctgcaatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaatggaacccttgttacacattcaaaccacattgaagtggtgaagctgatcaaatcg
ggctcatatgtggccctcacagtactgggccgccctccgggtcttgcccagatccccctg
tctgaagctgagtctgaaatgctgggagttactatttcctccccaaactctcctgcagca
gaacgcccgtacagtcctcatgaccgcctcacctccacacctcaatgggcgatgaaggaa
gagtacggccgcaacacctccccgaaactactgaaagacaaccaggaagctaaaacacac
attccacagctgcagggtcagctcttcaaggccaccggcgcaacacaggaggctgctcca
ggtggagaagcagatgatggtagcatgtttgagacggagcgcactctcgcagcgggagac
caaagtgctgacttgtcctggagcagcagcacacctatttctggatttggactcgtctct
ccagagagtttttgccagaggcagttgtccggcccaagtccaaagagcacacccaggaac
agcttcaactcctgccactccccggggacggaagatgccactgatctggactctttgtct
cccaccaacgtcagctgtccctcctctcgtctcatctcacatatcattggagctgaggat
gattattttgattctgaccatgagcagggtccatttctcttgcagacaaatggccagttt
aaccgctttaccagcattgagcagctcaaatctcggcccgcccaccttgcagctttcatg
catcacgtcatctctcaattcgatcctgctccggtgctgtgctacctctatgctgacttg
tacaagcagaccaactccaaagagaccagacgggtgtttatggacctccataccttcttc
attgatcgcggagcacacttgaaagtgccagttccggaatcaatttctgccgatcttgat
cggcggcggacagaattgatccccgaggaaataaacagacaacatgttcaagcactgcag
gattctttgctccctgacattcagaagaaccttgaggatttcagacaaaagcgcagtatg
ggcctaactgttgctgaagtggagttgggaaggctggaccaagaacgtgtgagagatcgc
gtcaccctcgagcgtgaacgctcttatgctgaaaacatcataaccaagatagaggacatc
ctggttaccgctcagacgacagaggaggagaagtgcactacaatgcagtatgtcatttat
acatacatgaagcaccttggagtgagggtcaaggaaccccgcagcctagagtcaaaacgg
gtcaggatcaactttcttcctaaaattaagaaaagcattaagacagaaaaagatggcgaa
gagaaggtgaagaagcccaggtttcctagtatcctcggacctcagcgtcgaccgagccgc
attgaagcagcttcagtgggcaaagccctcgacggtcggcccaagcctcagaagcaattg
tctcagcctagtcttggggccagcgaacaaacagacgggggtcgtttaagaagcagccaa
tccagcgagggctctgagctcacacaccccacatcgctgaccacctcatctcctaacagc
accaccttcagctccgatgccagccgagacacagactcaggtgggactccaacttcaggc
cccaccaggctgagtgacggtcttcagtctgaccccctcgatgggttggcataccctgca
tcgcactttgacctttacagcctggaccaactccaagaggatgacagagaaactgacaga
acgcacgagggaacaccaaaggccatcagaaggctcgagggattgggtcctattgatgtc
cagagtgaggacgaccagggaacagactcggaacatgaccccctcaactggcagcagctg
gtgggacgcgaggttctagcaggtctcaggcctcttgaaatcaagagacaggaagttatc
aatgagctgttttacacggagcgtgcacacgtgcggatgctgagagttttggatcacgtc
ttctaccagaagctttcaaaagatgccatcctgcctcctgtcgacatcaaaaacatcttt
gccaacttggaggagattctccagctacatgtttccattatggaccaaatggcagcagtt
cggaagcgaaatgagtcgtcggtcattgatcagataggagatgacttgctgtcctggttc
agtggtggagaggaggagaagatcaagcaagccgtgggcacgttctgcagtaatcagcct
tttgctctggagatcatcaagaccaagcagaagaaagactcgcgcttcatttcattcatc
caggaggcgcaaagtaaccaattgtgcaggcgactgcagctgaaggacattattcctgtt
gagatgctgaggttcaccaagtacccactgctgttggacaacatctccaagtacacagat
gatgcagtggagaaggacaaggtgaagcaggcagccgattgctgtcgaaagatcctcaat
catgtcaaccaggctgttaaagaatccgaagacaagcagaggctagaggactatcagaga
agactggacctatcttctttgaagcagacggacaacccaatgatcctggagctaaagaac
ctggatctaaccaagaaaacaatggtgcacgaggggccactgtcatggaaagtgaacaag
gacaagaccattgagctatacactctcctgttggaggacatcctggtcctgctccagaaa
caagatgagcgtctcatcctcaagtgtcacagcaagaacttggcgggaaccgccgacacc
aagcacatttttagccccatcatcaagctcaacactgtgctggtgcgctcggtggctaca
gacaacaagtccttcttcgtgctctccatgtctgacaacggtgcacagatctatgagctg
atggcatccactgtctcggatcagagaacgtggcagaatttgatcacgcaaagagccgaa
gccatgaaagtcaaaccccacagtgtcatacctttacctcagacagatggagagcgagat
ggtgtggagatcatcacagatggcgtctctcgactgagtaaagacccagaccgtacatcc
actggcagcactcagtccacagataaagagagcagtccggctgtgaggcgtgtggctccg
agccctcttcccgctaacaatccttttgaggcagggaatgaagacgaggaggtggaggaa
ggttttgtggatccagagctcccataccgagggaccgaagatggcagcacagattccttt
aatgtgtttccctctagagcggatgaagcactgaaaacattgtcagcgctgaagcaggtg
ttggtgacacagctcatgtcgcaggaggctgtcgagcgaaccaagcggtccacaggagct
cgcctcctcaggaccacctcgctgaggacgccaatcgagaaacgtgtgatggtccacaac
ggctcggagaggaacaactcccagacggaggaccccacgcaggacttgggctccggcgac
acgggcttctttgattcccccgaagattatgcaggatttttagtcctggaaggatacggc
gggccaggggagagcaataccgatgatgacatgtcgcctgccgggaagcagctgagtgcg
tctcaaggctgcgctgccgattcgggcatcaatctgaggttctcctcggcgtcgtacgct
gggagcctctcatcttttagcagacaagtcctgtctcacctgcgaaaccttcaggccaac
ctgaaccatctgaaggaggttgaagccaaatacaataatcttcgtcagaggccggagaga
tcgaccacacactcggatggaaacaaagagaagagatag
DBGET
integrated database retrieval system
