Hippocampus comes (tiger tail seahorse): 109527041
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Entry
109527041 CDS
T04969
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03440
Homologous recombination
hcq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109527041 (top3a)
03460 Fanconi anemia pathway
109527041 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcq03032
]
109527041 (top3a)
03400 DNA repair and recombination proteins [BR:
hcq03400
]
109527041 (top3a)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109527041 (top3a)
DNA replication proteins [BR:
hcq03032
]
Eukaryotic type
DNA Topoisomerases
109527041 (top3a)
DNA repair and recombination proteins [BR:
hcq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109527041 (top3a)
FA (Fanconi anemia) pathway
109527041 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
DUF2256
zf-C2H2_10
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
109527041
NCBI-ProteinID:
XP_019744278
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MRVVNLLSKHLLRLGHQRPRIQLRCRSLAQDSLTALDMMRRGQIKRVLCVAEKNDAARGI
SEIMSNGMSVRREGLSRFNKIYEYEYHLFGQNVTVAMTSVSGHLLGLEFKAPYHKWLSCN
PVLLFDAEVEKYCPDGMIQIKRTLEKEVRQCQALIIWTDCDREGENIGFEIIDVCKAVKP
NLQVFRAKFSEITPNSIRRACETLSEPDVNISDAVDVRQELDLRIGASFTRFQTLRLQKI
FPLSLANQLISYGSCQFPTLGFVVERFKAIQAFVPETFYKIKVLHEVEEETVEFGWKRHR
LFNHTACLVLYQICMEDPLATVTSVASKPKSKWRPLPLDTVELEKLASRKLRISAKETMK
IAEKLYTQGFISYPRTETNIFPASLALRPLVEEQMQNPDWGAFAQRVLEQPGGPNPRQGK
NSDQAHPPIHPTKHINTLQGNEGRVYEFVVRHFLACLSQDALGQETVVDIDIAQEKFSTS
GLMIVARNYLDVYPYDRWSAKVIPVYEQGSQFQPSAIEMVDGQTSPPQLLTEADLISLME
KHGIGTDATHADHIETIKSRMYVGLTPDQRFLPGELGMGLVEGYNAMGYEMSKPHLRAEL
EADLKLVSEGRKDKRSVLQHHIQKYKAVFIESVRKAKKLDEALSPYLGAAQEIPETEQQD
MELQLPVRKCPHCGRDMVLRKRKEGNGKFLSCVGFPACKTAVWFPETVLEVSRDDSICST
CQPRPVHMLKFKFRRGSLPAVMPLEFVGCIGGCDETLREVLDLKYLQAGGGGGGGGGRED
PSRPAPPRPLSSNSRACVPPSTRSWTPQPRPPPGGNGLSERNSDVIVCNCGVDAILLIVR
KEGPNQGRQFYKCNSGACNFFLWADQPSHQGALQNHWPPPPPQRPPPPPSQFLAIRNTVG
AGGGAPNGGAGGLMCNCNEATVTRTVQKDGPNKGRVFHTCGKPRDQQCNFFQWADENLLA
QGGGPFNSNSGGGKKGRKLTGGKPPAAKKPRSCGICHTPGHTRLTCPQR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagtgaacctcctctcaaaacatctgcttcgactgggacaccagaggccacgt
atccagttgaggtgtcgttctctggcgcaagactcattgacagcgttagacatgatgcgg
aggggtcagatcaagcgggtcctctgcgtcgccgagaagaatgatgcagccagaggcatc
tccgaaatcatgtccaatggcatgtccgtgaggagggaaggactgtccaggtttaacaag
atctatgagtatgaatatcatctctttggtcagaatgtgacagtagcaatgacatcagtc
tcaggccatttattgggtcttgaatttaaagctccataccacaaatggctcagctgcaat
ccagtgctgttgtttgatgccgaggtcgagaagtattgtccagatggcatgatacaaatt
aagcgtacattggaaaaagaggtgagacaatgtcaggctttaattatctggaccgactgc
gaccgagaaggagagaacattggctttgaaataatcgacgtctgtaaagcagtgaagcct
aatttgcaagtgtttcgggcaaagttttctgaaatcacccccaactccattcggagagcc
tgcgagacgctatcggagccagacgttaacatcagcgatgccgtcgatgtccgccaagag
ctcgacctgcggataggcgcatccttcacacgattccagacccttcgcctccagaagatc
ttcccgctgtctctggccaatcagctcatctcttacggcagctgccagtttcccactctg
ggtttcgtagtggagcgtttcaaagccatccaggctttcgttcctgagactttctacaag
atcaaggtgctgcatgaagtggaggaggaaactgttgagtttgggtggaagagacaccgt
ctcttcaaccacacagcttgcctagtgctttaccagatctgcatggaggatcccttagca
acagtcacctcagtcgcgagcaagcccaagagcaaatggagaccactgccattggacact
gtggaactggaaaaactggcatcgcgaaagcttcgaataagtgcgaaagagaccatgaaa
attgcggagaaactttacacacaagggtttattagctaccctcgcacggaaacaaacatt
ttcccagcatcccttgctctcagacctttggtggaagagcagatgcaaaaccctgactgg
ggggctttcgcccagcgggtgcttgagcagcccggtggtcccaacccacgacagggcaaa
aattctgaccaagcccatccccctattcacccaacgaaacacatcaacacactgcaggga
aatgaaggacgtgtgtatgagttcgttgtccggcatttcctggcttgtttatcccaggat
gctttggggcaggagacagttgtggacatagacatcgctcaggagaagttttccacttca
ggactcatgatagttgcgaggaattacttagatgtttatccttatgacaggtggagtgca
aaggtgattccagtgtacgaacaaggttcccagttccagccgtcggccatcgagatggtg
gacggtcagacgagtcctccacagctgctcaccgaagcggacctcatatcactgatggag
aagcatggcatcggtaccgacgcgacacacgcagaccacattgaaaccatcaaaagtcgc
atgtacgtgggcttgacgcctgatcagagatttcttcccggcgagcttggcatgggactg
gtggaaggttacaacgccatgggctatgagatgtcaaaaccacacctgcgggctgagttg
gaggcagacctcaagctggtatcagagggaaggaaggacaaaaggagcgtgttgcaacac
cacatccagaaatacaaggctgtcttcatcgagtcggtcaggaaggccaaaaagttagac
gaagctctgtcgccgtatttgggtgctgcccaggagatccctgaaactgaacagcaagac
atggagctccagctgcctgtcaggaagtgtccccactgtggacgggacatggtgctgagg
aagaggaaggagggaaacggtaagtttctgtcctgcgtgggcttcccagcctgcaaaaca
gccgtatggtttcctgagacggtgctggaggtcagccgagacgacagcatttgttccacc
tgccagccgcggcccgttcacatgttaaagttcaagttccgtaggggcagccttcccgcc
gtgatgcctttagagtttgtcggctgcatcggtggatgtgacgagactctccgagaggtg
ctggaccttaaatatctgcaagcaggaggaggtggaggaggagggggaggaagagaggac
ccctcaagaccagcaccaccccgaccattaagttcaaactcgagggcttgtgttccaccc
tccacacgctcttggaccccgcagcctcgcccaccaccagggggcaatggcctcagcgaa
cgcaacagcgatgtcattgtgtgcaactgtggtgtggatgcaattttgctaattgtgcgc
aaagaaggccccaaccaaggacggcagttctacaagtgcaattcgggggcttgtaatttc
tttctttgggcggatcagcccagccatcagggggccctgcagaatcattggcctcctcca
ccaccacagcggccgcctcctccaccctctcaatttctggcaatcaggaacacggtcgga
gcaggtggcggtgcacctaatggaggcgctggaggtctgatgtgtaactgtaatgaggcc
acagtgactcgcaccgtgcagaaggacgggcccaacaagggacgggtgttccacacctgc
gggaaaccgagagaccaacagtgtaacttcttccagtgggctgatgaaaacctcttggca
caaggtggcggcccgtttaacagcaacagcggcggagggaaaaagggaaggaagctaacg
ggcggcaaaccccccgctgccaagaaacctcgttcctgcggcatctgccacacgccagga
cacacgcgcctcacttgtccgcagcggtga
DBGET
integrated database retrieval system
