Hippocampus comes (tiger tail seahorse): 109527276
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Entry
109527276 CDS
T04969
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109527276 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109527276 (taf5)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109527276 (taf5)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109527276 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
109527276 (taf5)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109527276 (taf5)
STAGA complex
109527276 (taf5)
TFTC complex
109527276 (taf5)
SAGA complex
109527276 (taf5)
SLIK complex
109527276 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
Nup160
WD40_like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
109527276
NCBI-ProteinID:
XP_019744640
UniProt:
A0A3Q2Y794
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MAAIQGGMAEAVEIKDIKTEPPVDAVVNNNANDGSVLSASPGPGGSVGSTKPATGALEEK
QTLLAILQFLKKNQLSESVDILRREAGLPQDLFDLKGADASSGSGGTPGTVEGGGLDANS
LLSRVTSSSAAQAPVKAPPAEDQPDVSVVLSAYSQQGDPALYEVYYSGLKKFIETVLDCH
RAELSQVFYPLFVHMYLELVYNNHENVAKAFFEKFSGDQECYYREDLQVLSGLTKKEHMR
GNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQI
DAMSGSLAGEGKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSTGS
KSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGRDNLPSICFYSFLNAYQG
LTAVDFTDDSSLIAGGFADSSVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKT
ASESKLLYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ
FSPHGYYFVSGGHDRVARLWVTDHHQPLRMFAGHLADITCTRFHPNSNYVATGSSDRTIR
LWDVLNGNCVRIFTGHKGPIHALSFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTD
TIYSLKFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTATTGHIHLQDNSQELLLGC
YTTKSSPVLHLHFTRRNLLLAAGGYNP
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatacaaggcggtatggccgaggctgttgaaataaaggacattaaaacagaa
ccacccgttgatgccgtcgtaaacaacaatgcgaatgacggaagtgtactttctgcgtct
cccgggcccggtggttcggttggaagtaccaaacccgcaacgggagctttggaggagaag
caaacgttgctggcaattctgcaattcctgaaaaagaaccaactgtccgagtctgtcgac
attttgcgccgtgaagctggattaccccaggatttgttcgatttgaaaggtgctgatgca
tcctcaggttctggaggtacaccggggactgtggaaggaggaggtctggatgccaactct
cttctgagccgagtgacgtcctcctcagcagctcaggcgccagtcaaagctccacccgca
gaggaccagccggatgtgagtgtggtcttgtctgcttacagccagcagggagacccagcc
ctctatgaggtttattacagcggtttgaaaaagtttatagaaactgttttggactgtcat
cgagcagaactgtcccaggttttctacccactgtttgttcacatgtacctggaactagtg
tacaacaaccatgagaatgtggccaaggcgttctttgaaaagtttagcggggatcaagag
tgttattacagagaagaccttcaagtgttgtcgggtttgacaaagaaggagcacatgaga
ggcaacgagactctgctcgactttcgcaccagcaagtttgttctgcgcatctcccgtgac
tcgtaccagttgctcaagaggcacctgcaagagcgccagaacaaccaaatctggaatatc
atccaggagcacctctatattgacatctttgatggcatgccacgcagcaagagccagatt
gatgccatgtctggtagtctggctggagagggcaagagagaggccaataaggcaaaggtt
tattacggcttgcttaaggaaccggaaattgaactgccacttgatgatgaggacgaggaa
gcagagaacgaggagggtaaacccaagaagaagaaaccaaaaaaggacagcacgggctcc
aagagcaagaagcaggatcccaatgcaccgtcacaaacaaggatacctcttccagaactg
aaggactcggacaaactggacaagatcatgtacatgaaagaggccaccaagaggatccga
ctgggacgagataatctcccttctatttgcttctactcttttcttaatgcataccagggc
ttaactgctgtggacttcacagatgactccagtttaattgcaggaggcttcgccgactcc
tcagtcagagtgtggagtgtcactcccaaaaagctacgcaaagtcaagtcagcagcagac
ttaaacctgattgataaagagtcagacgatgtgctggagaggatcatggatgaaaagaca
gcgagtgagtccaagctcctgtacgggcacagcggtcccgtttatggaatcagcttcagc
ccggacaggaactacctgctgtcgagctctgaagatggcacggtgaggctgtggagtctt
caaaccttcacctgtctggtgggctacaaaggtcacaactaccctgtgtgggacacccag
ttttcccctcatggctactattttgtctccgggggtcatgacagagttgcccgtctatgg
gttacagatcaccatcagcctctgcggatgttcgctggtcacctggcggacatcacttgc
acccgcttccaccccaactctaattatgtggccacgggttcatctgatcgtacaatccgc
ctgtgggatgtcctgaacgggaactgtgttcgcatcttcacaggtcacaagggcccaatc
catgctctgtcattctctcccaacgggaagtttttggcttcgggggccactgacggtaga
gttcttctttgggacattggtcacggactcatgattggagagctcaaaggccacacagac
accatctactctctcaagttcagcagggatggtgaaattcttgcctctggctctatggat
aacacggttcgcctgtgggatgccatgaaagcatttgatgatttggagacggacgacttc
actgcaaccacaggacacattcatttacaagataactcacaggagcttctgcttggctgc
tacacaactaaatcctcacctgtcctacaccttcacttcacccgcagaaatctgctcttg
gcagcaggtggctacaacccataa
DBGET
integrated database retrieval system
