Hippocampus comes (tiger tail seahorse): 109527401
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Entry
109527401 CDS
T04969
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109527401 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109527401 (exosc1)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109527401 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109527401 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109527401
NCBI-ProteinID:
XP_019744882
UniProt:
A0A3Q3DMX9
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCSVEDCTPGTGVYLRHGYIYSSLAGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVEMYKC
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPNSWCEMQCPLTHGKE
FRKVARVQPEYLHA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccatgaagctgtgtgttcctggtgataaactttgcagtgtagaagactgtact
ccaggcacaggcgtatacctgaggcatggctacatttattcctcacttgcaggctatgtg
ctcaagaagaacgaaggcgaggagttaccagtcatctctgtcgtgagagaaacggaaacc
caactactgccagatgttggtgcaattgtcacttgtaaggtaactagtatcaatcccagg
tttgccaaggttcatatactttatgtcgggtccacaccactgaaggaccgcttcagagga
actatcagaaaagaagatgtcagggcaacggagaaagacaaggtggagatgtacaaatgt
tttaggcctggagacattgtcctggcgaaagtgatctctctgggcgatgtgcagtccaac
tacctgttgaccacagctgagaatgaactcggggtggtggtggcccacagtgaagcaggt
gctcagatggttccaaacagctggtgcgagatgcagtgtcccctgacgcatggcaaagag
tttcgcaaagtggcaagggtccagccagagtatctgcacgcgtga
DBGET
integrated database retrieval system