KEGG   Hippocampus comes (tiger tail seahorse): 109527401
Entry
109527401         CDS       T04969                                 
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109527401 (exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109527401 (exosc1)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109527401 (exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     109527401 (exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 109527401
NCBI-ProteinID: XP_019744882
UniProt: A0A3Q3DMX9
LinkDB
Position
Unknown
AA seq 194 aa
MSPMKLCVPGDKLCSVEDCTPGTGVYLRHGYIYSSLAGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVEMYKC
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPNSWCEMQCPLTHGKE
FRKVARVQPEYLHA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcacccatgaagctgtgtgttcctggtgataaactttgcagtgtagaagactgtact
ccaggcacaggcgtatacctgaggcatggctacatttattcctcacttgcaggctatgtg
ctcaagaagaacgaaggcgaggagttaccagtcatctctgtcgtgagagaaacggaaacc
caactactgccagatgttggtgcaattgtcacttgtaaggtaactagtatcaatcccagg
tttgccaaggttcatatactttatgtcgggtccacaccactgaaggaccgcttcagagga
actatcagaaaagaagatgtcagggcaacggagaaagacaaggtggagatgtacaaatgt
tttaggcctggagacattgtcctggcgaaagtgatctctctgggcgatgtgcagtccaac
tacctgttgaccacagctgagaatgaactcggggtggtggtggcccacagtgaagcaggt
gctcagatggttccaaacagctggtgcgagatgcagtgtcccctgacgcatggcaaagag
tttcgcaaagtggcaagggtccagccagagtatctgcacgcgtga

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