Hippocampus comes (tiger tail seahorse): 109527689
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Entry
109527689 CDS
T04969
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109527689 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcq04515
]
109527689 (lrrc4b)
Cell adhesion molecules [BR:
hcq04515
]
Immunoglobulin superfamily
NGL family
109527689 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRR_LRWD1
LRRNT
LRR_NXF1-5
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
109527689
NCBI-ProteinID:
XP_019745297
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MRIATLTCLPGPSSPFLFALLYSLLALVVLVTSSSSSSSSCPGRCTCSNQASRVICTRQS
LDDVPDSISVNTRYLNLQENAIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNL
NTLELFDNHLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLD
FISDAAFVGLFNLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVLLR
KLWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHKLERVHLNHNPWVCN
CDVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVT
EGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTC
MVTNAAGNTTATAVLNVTAADVSVNYTYFTTVTVESVETPGEEESALVAINETFIRVLPV
PTPSGHLWPDSIPTTVSSLSIDWSSPRATRPTFTVPITEPGFSGLDDVIKTTKIIIGCFV
AITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELSGGAGGRGGGGGISGGGAL
TQSSGIGGGQSLRRHHSDVVTLPHLTRSEHLNYYKTHHFGNNMVGLGVNNNNNPLPCSQN
MTMSYSQVGGGLGTCGTLPTPVPLPQLSLHSSLKGLMAKGQNEPLLFKSGSKENVQETQI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcttcccccttcctctttgcgctg
ctctactccctgttggcgctggtggtgttggtcacctcgtcctcatcctcgtcgtcctcg
tgcccgggccgctgcacttgctccaaccaggccagccgcgtcatctgcacccgccagagc
ctggacgacgtccctgacagcatatccgtcaacaccagatacctcaacctacaggagaac
gccatacaggttatcaagtcggacaccttcaagcacctgcgacacctggagatcctccag
ctctccaagaaccagatccgtcagatcgaagtaggcgccttcaatggcctccccaacctc
aacacgctggagctgtttgacaaccacctcacgctggtgccatcgcacgccttcgagtac
ctcagcaagctgcgtgagttgtggctacgcaacaaccccatcgagacgctgccgggctac
gccttccaccgcgtgccctcgctgcgccggcttgacctgggggaacttaagaagttggac
ttcatctcggacgccgcctttgtgggcctgttcaacctgcgttacctgaatttggggatg
tgcggacttaaggacatccccaagttgacggccctggtgcggttggaggagctcgagctg
tcagggaaccggctggaaatcatccgtcccgggtccttccagggtttggttttactccga
aagctgtggctcatgcactcgcaggtgtcggtcattgaacgcaacgccttcgacgatttg
aagaacctggaggagctcaacctgtcccacaattccttacactcactcccgcacgatctg
ttcacgccgttgcacaagctggagcgggtgcacctgaaccacaacccttgggtatgcaat
tgcgacgtgctttggctcagctggtggctgaaggagacggtgcccagcaacaccacctgt
tgcgcccgctgccacgcgcctcccttcctcaagggaaaatacatcggcgagctggaccag
agccacttcacctgctacgcgcccgtcatcgtggagccgcccaccgacctcaacgtcacc
gagggcatggcggccgagctcaagtgccgcaccagtacctccaccacgtcagtcaactgg
atcacgcccaacggtactctgatgacccacggctcgtaccgcgtgcggatctcggtgctg
cacgacggcacgcttaacttcaccaacgtcaccctgcgagatacgggccagtacacctgc
atggtgaccaacgcggccggaaacaccacggccaccgccgtgctcaatgtcaccgccgcg
gacgtcagcgtcaactacacttacttcacgacggtcacggtagaaagcgtggagactccg
ggagaagaagagtctgctctggtggctatcaacgagaccttcatcagagtcctcccggta
ccgaccccgtcggggcatctgtggccagacagcatcccaacgacggtctcctcactctcc
atcgactggtcgtccccccgcgccacccggcccaccttcactgtgcccatcacagagccg
ggcttttctggcctcgacgacgtgatcaagaccaccaagataatcatcggctgcttcgtg
gccatcactttcatggcagcggtgatgttggtggtcttctacaagctgaggaagcagcac
cagctccacaagcaccacgggccggcccgggctatcgagatcatcaacgtggaggacgag
ctgagcggcggggcgggcggccggggcggcggaggtggcatctcagggggcggtgccttg
acgcaaagcagcggaatcgggggcggccagagtctgaggcgccaccattcggacgtggtc
accctgccacacttgacccgttcggagcacctcaactactacaagacgcaccactttggc
aacaacatggtgggactgggtgtcaacaacaacaacaacccactgccttgctcacagaac
atgaccatgtcctattcccaagtgggcggcggcctggggacctgcggcaccctgcccaca
ccggtcccgctgccccagctgagcctgcacagctccctcaagggcctcatggccaagggg
caaaacgagcctctgctttttaagagcggctccaaggaaaacgtacaggagacccaaatc
tga
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