Hippocampus comes (tiger tail seahorse): 109528946
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Entry
109528946 CDS
T04969
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109528946 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcq04812
]
109528946 (clasp1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109528946 (clasp1)
Cytoskeleton proteins [BR:
hcq04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
109528946 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Sec7-like_HUS
Cnd1
Adaptin_N
Vac14_Fab1_bd
MMS19_N
MMS19_C
ParcG
Motif
Other DBs
NCBI-GeneID:
109528946
NCBI-ProteinID:
XP_019747562
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MESNMESCLAQVLQKDVGRRLQVGQEIIDYILDKDKSYDLEQDQTALDKMVDGVASSWVN
SSNFKVALLGLDLLSALVTRLQERFRAHVGTALPSLIDRLGDAKDQVREQDQALLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLTMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMSCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMISSSGSDK
NFEDEDSVDGGRSSSSSSSKAPPSGRRTVMTTRRPSSATPAKATGKEAAAGAVDEEDFIK
SFEDVPSVQIYSNRELEDQLTKIREILSDDKHDWEHRVVALKKVRSLMLAGAAEYEGFPQ
QLRLLEAPLKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESVMPILLNLVPNSAKI
MATSGMAAIHLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLERHV
AVLTETIKKGIHDADSEARSIARKCYWGFHGHCSREAEHLFQALESTYQKALQSHLKSSD
SIVSLPQSDRSSSSSQESLNRPLSVKTVIGGSIARTKLVSTRMPITSGSLQRSRSDVDVN
AASTAKSRVPPVPASSAFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSASGASPSV
VDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRATASASNTPADKR
SRIPRSQGCSRETSPSRMGLASLCGKKALLPAALPYRTLARSRIPRPSMSQGCSRDTSRE
SSRDTSPARGFTPLASRRHSRSTSALTADPHGPSERYGLIHQARISASVNAMRVLNTGTE
VEAAVADALLLGDSRNKRKPMRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPHYL
RQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKGQRILSRVELKRLCEIFTRMFADPHSK
RVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFP
FDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFINSSETRLAVSRIITWT
TEPKSSDVRKTLHYWVTEELAGGINATALLSGESHLQERCKQAAQVVLISLFELNTPEFT
MLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGCMPPRHTPSRTSPLTSPTNC
SHGGMSPSRLWGWGVDGLSKQPPAPTPLPPPNSTSAAPSFRVLRRAHSPSVMEYDTENMN
SEDIYSSLRGVTEAIQSFSYRSQEDLNESVRRDGKRDDAAGRDGVASTPASDARLGFDVP
EGGRTALDNKTSLLNTPSPRSFSGPRSREFAPYSHGETICTYDKSALKEAVFDDDVEQFR
DCRRKESGENTMMLSVGQDNSDMVADLLKELSNHNERSEERKGALVELLKITREDSLAVW
DEHFKTILLLLLETLSDKDHTIRALALRVLKEILKNQPARFKNYAELTIMKTLEAHKDSH
KEVVRAAEEAASTLAGSIHPEQCVKVLCPIVQTADYPINLAAIKMETKVIERIAKDSLIQ
LLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKR
AQTTNSNSSSSSDVSCHS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacatggagagctgcctagcccaggtcctgcaaaaagatgttggccgtcgt
ctccaggtgggacaagagatcatcgactacatcttggataaagacaagtcttatgacctt
gaacaggatcagactgctcttgataagatggttgatggcgttgccagctcctgggtcaat
tccagcaacttcaaggtggctctgctaggcttggatctcctctctgctttagtgacgagg
ttacaagagagatttcgggcccatgtcggaacagctctacctagtcttatcgatcgattg
ggagatgccaaagaccaagtaagagaacaagaccaagcactgctgcttaagatcatggaa
caagctgcatccccacagtatgtgtgggacagaatgcttggaggcttcaaacataagaac
aacaggaccagggagggagtctgcctttgccttattgccacattgaccatgtatggagcc
caaggcttgactctcagtaagattgtcccccatatatgtaacctgttgggggatcccaca
agccaggtacgagatggggctatgagttgtttggtggagatctaccgtcatgtgggtgag
agggtgaggatggatctcagcaagaaaggcctgcctcagtcacggttgaatgtaatcttc
agcaaattcgacgaagttcagagatctgggaacatgatctcctcttcgggttcagataag
aactttgaagatgaggactctgttgatggaggccggtcctcctcttcctcatcctccaaa
gcacctccaagtggcaggaggactgtaatgactactagaagacccagctcagcaacccca
gcaaaggccacaggtaaagaagcagctgctggtgctgttgatgaagaggatttcataaaa
tcttttgaagatgtgccctcggtccagatttactcgaacagagagctggaagaccagttg
acaaagattcgagaaattctgtcagatgacaagcatgactgggagcacagagtagtagcg
ctaaaaaaagttcgctcgctcatgctggctggggcggcggaatatgaaggcttccctcag
cagctgcgtctgttggaggcaccgctcaaactgtcggctaaagatctacgctcccaggtg
gtccgcgaggcctgcatcactcttggacatttatcatcattgctgggtaacaagtttgac
catggagcagagagcgttatgcctatactactgaaccttgtgcccaacagtgccaaaatc
atggccacatctggaatggctgccatccacctcattctcaggcatacacactacccacgt
cttatccccatcattacaagtaactgcacatctaaatcagtcgcagtcaggcgacgctgt
tatgaatttttagacctgatgctgcaagagtggcacacgaatactttggaaaggcatgtg
gctgttttaacagagaccatcaagaaaggcatacacgatgcagactcagaggccagatcc
attgcaaggaagtgttattggggtttccatggtcactgtagtcgagaggcagagcatctc
ttccaagcgctggagtccacatatcagaaagcacttcagagccatttgaagagctcggac
agcattgtgtctctaccccagtcggatcgttcctcgtcatcttcccaggagagtctgaac
cgacccctctcagtgaagacggtcattggaggcagcatagcgagaactaaactcgtgagc
acccgaatgcccattacatcgggttccctccagcgttcacgtagcgacgttgatgtaaat
gctgcctccactgccaagtcccgggtgccccctgtacctgcgtcttcggcgttcagctca
gcagctgcccttccccctggatcttatgcctccttagatggcacccctggtaaaagcgat
ggtcgtgttcgtaccagaaggcaaagttccggcagtgcaagcggagccagtccttcagtg
gtggatagtcgaggtcgaagccgagccaaagtggtttctcagtctcagcgatccagatca
gccaatcccatcagtgctggcagtcgctccagctccccaggcaaactgctcggacacagc
agctatggtcggatccctcgggcaacagcatctgcctccaatacaccagctgacaaacgc
agcaggatccctcgcagccaagggtgcagccgagagactagcccgagtcgaatgggctta
gccagcttgtgtggtaaaaaagctcttctccctgctgctcttccctaccgcacgctagcc
cggagccgcataccccgccccagcatgagtcagggttgcagtcgcgacactagtcgcgag
agcagccgtgacaccagccctgctcgtggctttactcctctggcttcccgacggcactcc
cgttcaaccagtgctctcacagctgacccccatggcccgtcagagcgttatggtttgatt
caccaagctagaatctcggcgtcagtcaatgctatgagggtccttaacactgggacagag
gtggaggcggcagtggccgatgctctgttattaggagactccaggaataagaggaagcca
atgagacggaggtacgaatcaccagggatgtactccgatgatgacgcaaacagcgacgcc
tccagtgcctgctcagaacgttcttacggctcaagaaacggcggcattccccattatctt
cgccagactgaggacgtggcggaggtgctgaaccactgtgccagctcgaattggtcagag
cggaaggaaggccttctgggactgcagaatctcctcaagggtcaaagaatattgagccga
gtggagctcaagagactttgtgaaatcttcacaagaatgtttgcagatccacacagcaag
cgagttttcagcatgttcctcgagacccttgtggattttatcacagtgcatcgagaggat
ttgcaagactggctgtttgtccttctcactcaattgctgaagaagatgggggcagacctg
cttggctcagtccaagccaaagtccaaaaggccctggacatcacaagggaatctttccca
tttgaccaacagttcaatattttgatgagattcattgttgaccagacacagacaccaaac
ctcaaggtaaaggttgcaattttgaagtacattgagtctttggcacggcaaatggaccca
acagactttatcaactccagtgagactcgcctggctgtatcacgcattatcacgtggacc
actgaacccaaaagctctgatgtcaggaagaccctacattactgggtgactgaggaacta
gctggcggaatcaatgctacagccttactgtccggtgagagccacctgcaagagaggtgt
aagcaggcagcccaggtggtgctgatatcattatttgagctcaacacaccagagtttacg
atgctgctgggagctctgccgaagacattccaggatggcgccaccaaattattgcacaac
cacctgaagaactccagtaataccagtagcagtgtggggtctccaagtaacaccattggt
tgcatgccacctcgccacacgccaagtcgaaccagcccactgacctctccaaccaactgc
tcacacggaggaatgtctccaagtcggttatggggttggggtgtcgatggcctgtcaaag
caaccccctgcccctactcctcttcctccgcctaactccacctctgctgccccttctttc
agggtcctgcgcagagcacactcacccagcgtgatggagtatgacactgagaacatgaac
tcggaggacatttacagctcactccgtggcgtgactgaagccatccaaagctttagctac
cggagccaggaggacctcaatgagtcagtcagacgagacggcaagcgagatgatgcagct
gggagagacggagtggcatcaacgcctgcttctgacgctcgcttgggctttgatgtaccg
gaagggggtcgaactgctttggacaacaaaacttcactgctcaatacgccatcaccgcgc
tccttctccgggccacgaagtcgggagtttgctccttacagtcacggagaaacaatctgt
acctatgacaagagtgcccttaaggaggctgttttcgatgatgatgtggagcaatttcgt
gactgccgacgtaaagaaagtggtgaaaacacgatgatgctctctgttggtcaggacaac
tctgacatggttgccgacctgcttaaggagttgtccaatcacaatgagcgctctgaggaa
cgtaaaggtgccctggtggagcttctgaagatcacgagagaagacagcctggctgtgtgg
gatgaacattttaaaactatacttctcctcctgctggagacactcagcgataaagatcat
actattcgagccttggcgctgcgcgtgctgaaagaaatattaaagaatcaaccagcccgt
ttcaagaactacgcggagctaaccatcatgaagaccctcgaggcccacaaagattctcac
aaagaggtggtgcgtgcagctgaagaagccgcgtcaacactggctggatccatccatcca
gaacaatgtgtcaaggtgctgtgcccaatagtacagacagcggattacccaatcaacctg
gctgccatcaagatggaaaccaaagtcattgagcgcattgctaaggactctctaatacag
ttgctggtggacatcatcccaggactcttgcagggctatgacaacacagagagcagcgtt
cgcaaggccagcgtcttctgtctggtggctatatactccgtaattggagaggagctcaaa
ccccacttggcacagctcactggcagcaagatgaaattactgaatctgtacatcaagcgg
gcccagaccacaaacagcaatagcagcagttcctccgatgtctcctgtcacagttaa
DBGET
integrated database retrieval system
