Hippocampus comes (tiger tail seahorse): 109529312
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Entry
109529312 CDS
T04969
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcq03016
]
109529312 (trub1)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
109529312 (trub1)
Transfer RNA biogenesis [BR:
hcq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109529312 (trub1)
Prokaryotic type
109529312 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
109529312
NCBI-ProteinID:
XP_019748197
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MSYSDEKNMAGSNTAAPITSSLSKLQSLNGLFAIYKKQGPTSADVLNKLKETLLKEAGVQ
NPNPRKRKKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLAGSKKYTAVAELGQATD
TLDATGSVTDEKDFQHITKFDVEEKLNNFVGNIMQVPPLYSALKKDGQRMSVLLKKGEKV
EAKPARSVTVYNLTLQEFKPPFFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELVRTKQ
GQFTLEEHALHEEQWTLEHVLKSLQPCPDSEKTPDGMAAPDGGT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatagtgacgaaaaaaacatggctggaagtaacacagctgcacctattactagt
tctctatcgaaactgcaatcattgaatggactctttgcaatttataaaaagcaagggccg
acctctgcagatgttttgaacaaactgaaagaaactttactcaaggaagctggcgtgcag
aacccgaacccgagaaagaggaaaaaacagagtctgaagatgggtcacggaggaacgctc
gacagtgctgccagtggagtattagttgttggtgttggaaatggcacaaaaatgctcagc
acaatgttggctggttcgaagaaatacactgctgtagcagaattgggtcaagcaacagac
acccttgatgcgactggcagtgttacagacgagaaagatttccaacacattaccaagttt
gatgtggaggagaagctgaacaattttgtgggcaatatcatgcaagtcccaccactttac
tcagctttgaaaaaagatggccagcgaatgtctgtccttctgaagaaaggtgaaaaggtc
gaggccaaacctgccaggtctgttacggtgtacaacttgaccctgcaagagttcaaaccg
cccttcttcactttggatattgaatgcggtggtggattttatgttcggagtttggtggat
gacctgggaaaagcactctcgtcgtgtgctcacgtcaaggagctggtccgcaccaagcag
ggtcagttcactttggaggagcatgccttacacgaggagcaatggacactggaacacgtt
ctcaagtcgctgcaaccatgcccagattcagaaaagactccggatggtatggcagcacca
gatggtggaacatga
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