Hippocampus comes (tiger tail seahorse): 109529364
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Entry
109529364 CDS
T04969
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04137
Mitophagy - animal
hcq04140
Autophagy - animal
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109529364
04137 Mitophagy - animal
109529364
04148 Efferocytosis
109529364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109529364
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109529364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
HIF-1
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
109529364
NCBI-ProteinID:
XP_019748263
UniProt:
A0A3Q2Y3X3
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MNMPDKNKPKDTGHIATPVNDNMDDGDEANVTVKGSCSEQRKLRSRDAARCRRGKETELF
YDLARTLPLPRRVSTHLDKAAIMRVTLSVLRMHRLLHSGTESPKASEEVDDDDDEDPADV
LYTQALSGFIVVITAEGDIIYLTDNVSKHIGIPQLELLGQSVYDFVHPCDQEELRDLLMH
PVCSKKLSGGQLRQMNFFLRMKSTLTSRGRTVNIKSASWKVFHCTGHMRALGDSSAALPA
DTVMTLLCEPVPHPSSVDFPLDTHTFLTRHSMDMRFTHCEGRLGDLVGYEADDLIGRSVF
EFYHAMDSVHVNKSLHTLLAKGQVSTSPYRFLASGGGFVWTETQATVLYNNKTSHAEAVV
CLNFVLSAVEQSDVFFSSEQIRAGHRLKAEHLDENTDAGESSGNSSSPPEILLPPTAEDK
DAVAPLTGDFITLSFATPRSLSNIPEDPQDLCTPQLRQLLLPIFNPDSSSSSSSSPDPEP
AHSNSGSVRDTSEVEKLFAFWPEDGDKMQDNMQKVMDGVDLDMLAPYISMDDDFQLSFFS
AVPEANTDVNTEAPPELTAINRKRTHNSDEDILSQLIAADDKRHKHDSDAASQENQLLLS
HVLLGCLTESQSEEEPGTKGRSHLLTDRDPIFGGMRGLCDTTSLMMDIFKSEPPPDLSPM
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcctgacaaaaacaagccaaaagacaccggacacatcgcgacaccagtgaac
gataacatggacgacggagacgaagctaatgtgaccgtcaaagggagctgctctgagcag
aggaagttacgttctcgcgacgcggctcgctgcaggcgaggtaaggagacagaactattt
tatgacctggctcgaaccctaccactgcccagacgcgtctccacacatctggacaaggcg
gccatcatgagggttaccctcagcgtccttcgtatgcaccgccttctccattctgggaca
gagagtccaaaggcatctgaggaggtggatgacgacgacgatgaggacccggcggatgtc
ctgtacactcaagcgctatctggcttcatcgtggtgattacggcagaaggagacatcatt
tacctgaccgacaatgtcagcaagcacattggcatcccgcagctggagctcctgggtcag
agcgtgtacgacttcgtccatccttgcgaccaggaggagctcagggacctccttatgcac
cctgtatgcagtaaaaaactgagcgggggtcagctgcgccagatgaacttcttcctgcga
atgaagagcactttaaccagcagggggcgcacagttaacatcaagtctgccagctggaag
gtgttccactgcacgggccacatgcgggcgctgggcgactcttccgcagcgctccctgcg
gacactgtgatgacgctgctgtgtgagcccgtcccccacccgtccagcgtggacttcccc
ttggacacgcacaccttcctcacccgccacagcatggacatgcggttcacacactgcgag
ggcaggttgggcgacctggtgggatacgaggcggacgatcttatcggccgctcagtgttc
gagttttatcacgcaatggactcggttcatgtcaacaagagcctgcacacattgctagcc
aaagggcaagtgagcaccagtccctaccgcttcctggcaagtggcggcggcttcgtgtgg
accgagacacaagccaccgtcctctacaacaacaaaacgtcacatgccgaggccgtggtc
tgcctcaactttgtgctcagcgctgtggagcagtcggacgtatttttctcctctgagcag
atccgtgccggccatcgcctcaaagccgagcacctcgacgagaacactgatgcaggcgag
agttccggcaatagcagcagcccgccggagatacttcttccgcccactgcagaagacaag
gatgccgttgctccgctgacaggagacttcatcacgctttccttcgccacgccgcgcagc
ctgagcaacatccccgaggaccctcaggacctttgcactccgcagctgcgccagctcctc
cttcccatcttcaaccctgactcttcgtcctcgtcatcatcctcgccggatccagagcca
gcacatagcaacagcggcagcgtgcgggacaccagcgaggtcgagaagttgtttgccttt
tggccagaggatggcgacaaaatgcaggataacatgcagaaggtgatggatggcgtggat
ctggacatgttggctccatacatctcaatggacgatgacttccagctcagtttcttcagc
gccgtcccagaagccaacactgacgttaacacagaggcaccacctgaactcaccgccatc
aacaggaaacggactcacaactcagatgaggacattttgtcccagctgattgcagcagat
gacaagcgtcacaagcacgacagtgacgctgcgtcccaggagaaccagctcctgctcagc
catgtgctactgggctgcctgacggagagtcaatcagaagaggagccaggcaccaagggg
cggagtcatcttcttactgacagagatcccatcttcgggggcatgagaggactctgtgac
accacatcactgatgatggacatcttcaaatccgagccgccccctgacttgtctccgatg
tcctga
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