Hippocampus comes (tiger tail seahorse): 109529402
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Entry
109529402 CDS
T04969
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109529402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcq02000
]
109529402
Transporters [BR:
hcq02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109529402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109529402
NCBI-ProteinID:
XP_019748345
UniProt:
A0A3Q2ZFM6
LinkDB
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Position
Unknown
AA seq
578 aa
AA seq
DB search
MWSKYCGGKPGQDALEERGHWGSKVEFLLAVAGNVVGLGNVWKFPYLCYKNGGGAFLVPY
LVFVVTCGVPIFLLETTIGQHTQEGSISCWWKMCPLAQGIGYAGVLILLYSCMTYIIILS
WALFYLLFSFNATLPWSTCNNYWNTVECFDVTTTRNQTNHTKRTSAAVEFWERRVLKISG
GIEEIGSIRWEVLLCLLTMWVICYFCIWKGVKSTGKVVYFTATFPYVMLLILLIRGISLP
GATQGIQFYLLPELSRLTDPQVWMEAGSQIFFSYSIGVGTLIVLGSYNPRSNNCYKDCFW
LCALNSCTSMVAGFAVFSVLGFMAHEQDVPIAEVAESGPGLAFIAYPMAVAMMPVPQVWA
VCFFIMIILLGLDTQFVCMEVVMTSITDLFAEVLRRAGRRECFVLLFCLTCFFSQLVMIT
EGGMYIFQIVEYYACNGACILFLCVFESLAVGWIFGADRLSGIITNMTGKRPNPFFKICW
RYLTPLVSLISFTCSLIQYRPLTFNRWYVYPTWAYVMGWMMALSSILLVPGWALYKLTTV
SGTLSQRLHRLCWPEPPDCTLALKRETAPHHITEEDLE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcaaatattgtggtggaaaaccgggccaagatgcacttgaggagagaggacac
tggggcagcaaagtggaatttcttctggctgttgctggaaacgttgtgggcctgggcaat
gtgtggaagtttccgtacttgtgctacaaaaacggcggcggtgcattcttggtgccatat
ctggtgtttgtggtgacgtgcggtgtaccgatcttccttttggagaccaccatcggccag
cacacccaagaggggagcatcagctgctggtggaaaatgtgcccattggctcaaggtatc
ggctacgcgggggtgctgatcctgctgtacagctgcatgacatacatcattattttgtcc
tgggccctcttctacctgctgttttccttcaacgccacgctgccctggagcacctgcaac
aactactggaacacagtggaatgttttgacgttacgacaacgaggaatcagaccaaccac
accaaaagaacttcagcagcagtggaattctgggaacggagagtgttaaaaatctcaggg
ggcattgaggagattggcagcatcaggtgggaggtgcttctgtgcctcctgactatgtgg
gtcatttgttacttctgcatctggaaaggggtcaaatcaacaggaaaggtagtgtacttc
actgccacattcccttatgtgatgctcctcatccttttgatccgaggaatctctcttccg
ggagccacgcagggaattcagttctaccttctgcccgagctgtcacgactaacagaccca
caagtgtggatggaggctggctcgcagatcttcttctcgtacagcatcggtgtgggcacc
ctgattgtactgggcagctataacccccgcagcaacaattgctacaaggactgcttttgg
ctgtgcgccttgaacagttgcaccagtatggtcgctggctttgctgtcttctcggtgctg
ggcttcatggctcatgagcaagacgtccctattgctgaggtggcagagtcaggccctggc
ttggcgttcatcgcataccctatggcggtagctatgatgccggtgcctcaagtgtgggcc
gtctgcttcttcatcatgatcatccttctgggtctggacacacagtttgtttgcatggag
gtggtgatgacatctatcactgacctatttgcagaagtactgcgtcgtgcgggaagacgg
gaatgtttcgtgctactcttctgcctcacgtgtttcttctcacaacttgtcatgatcact
gagggagggatgtacatcttccagattgtcgaatactacgcttgcaacggagcctgcatc
ctctttctctgtgtatttgaaagcttggcagtgggctggatatttggagcagatcgtttg
agcggcatcataacaaacatgacaggcaagcgtcccaatcctttctttaaaatctgctgg
cgctacctgacacccttggtctcactgatctcattcacatgttctctaattcaataccgg
ccactgacattcaaccgctggtacgtgtaccctacatgggcctacgtgatgggctggatg
atggccctctcctccatcttgctggtgccaggctgggcactgtacaagctgaccactgtc
agtggaaccctcagtcagcgtctccaccgtctgtgctggcctgagccacctgactgcaca
ttggccctaaagagagagactgcgccgcatcacatcacagaggaggatctcgaataa
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