Hippocampus comes (tiger tail seahorse): 109529752
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Entry
109529752 CDS
T04969
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109529752
04121 Ubiquitin system [BR:
hcq04121
]
109529752
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109529752
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109529752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
zf-BED
FAM200-ZBED5_RNase-like
DBD_Tnp_Hermes
hAT-like_RNase-H
DUF8247
Motif
Other DBs
NCBI-GeneID:
109529752
NCBI-ProteinID:
XP_019748743
UniProt:
A0A3Q3DV36
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MCAKSVKEEEYEEEVCGIKEEKEPQLLDAQAALRAAELHEVCLIATEQDRKRARSSDMWE
HFSLITPDKVQCLACSAELKYHGNTSSMVRHFAAKHGPALKQSNAMGRKQALDEALVNLV
VKDWQPFSIVDDCGFKALVASLDPTYALPSRRALKKMVAEKSEEEKSKAKAAVGGAEAVS
LTAETWSSIQTDARVAVTCHFLDDSMKVATALLGVLPLPEAHTSSHISERLTSLVEEWGI
EGKVTSVVTDAAPEMAASVRDLNLRHVLCFARSLHLVVKKSLDATAGLRELRGRARNLVA
LFKSSAAAQEKLRQAQAQMCRPAAPLVQEAEARWTSTFLMLQRLCQERRCLDAALAALGT
DAAAPLSPQDDETAAACLRLLAPFYQAAVEMSQEKRLAGSKVIPITKMLLLHLYETNGKT
THPTAKRLGHNLVSAMQETFDTLESQTALTLSTLLDPRFKTFGFYNQAQAQTSVKRLAAQ
CSQLIVYTPPGTPAEERASAWAQPGRRPLRAHHFCPFFCASGIDLWKSLDRDASEAMRWS
RNASVDATAEVQRYMSDPPLGRAEDPLAYWLSHQNVYPHLFRLAKHFLCTPASAVPCERV
FSKCGEEVSKKRNRLSPKSVEMIMYLNKSL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcaaaaagcgtgaaagaggaagagtacgaggaggaggtttgtggaattaaagag
gagaaggagccgcagctcctggacgctcaggccgcgctccgggcagcagaacttcacgag
gtttgtttgatcgccacggagcaagacaggaagagagcgcgttcttctgacatgtgggag
cacttcagcctcatcactcctgacaaggtccagtgcttggcgtgttcggcggaactcaag
tatcacggcaacacgtcctccatggtgcggcacttcgcggccaagcacggccccgctctc
aaacagagcaacgccatgggccggaagcaagcgctggacgaagcgctggtgaatctggtg
gtgaaagactggcaaccgttttccatcgtggacgattgcggcttcaaggcgttggtggcc
tcgctggatcccacctacgctcttccgtccaggcgggccctgaagaagatggtggcggag
aaatccgaggaggagaagagcaaggccaaggccgccgtgggcggcgccgaggcggtcagc
ctgaccgccgagacgtggagctccattcagacggacgcccgcgtggcggtgacctgccac
ttcctggacgactccatgaaagtggccacggcgctgctgggcgtgctgccgctgcccgaa
gcgcacacgtccagtcacatcagcgagcgcttgacctcgctcgtggaggaatggggcatc
gagggcaaagtgacgtcggtggtgaccgacgcggcgcccgagatggcggcctccgttcgc
gacctcaatctcagacacgtgctctgctttgcccgctcgcttcatctggtggtcaagaag
tcgctggacgccacggcgggcctgcgggagctgcgcggcagggcgcgcaacctggtggcc
ctgttcaagagcagcgccgccgctcaagagaagctgcggcaggcgcaggcgcagatgtgt
cgccccgcggccccgctggtccaggaggcggaggcgcgctggaccagcaccttcctcatg
ctccagcgcctgtgccaggagcgccgctgcctggacgcggcgctggcggcgctggggacg
gacgcggcggcgcccctgtccccgcaggacgacgagacggccgccgcctgcctgcgcctg
ctggcgcccttctaccaggccgccgtggagatgtcgcaggagaagaggctggcgggctcc
aaggtcatccccatcaccaaaatgcttctgctgcacttgtacgagaccaacggcaaaacc
acgcaccccacggccaagcgactgggccacaacttggtgtcggccatgcaggagacgttc
gacacgctggaaagccaaacggcgctgaccctttccacgctgctggaccccagattcaaa
accttcggcttctacaatcaagcgcaggcgcagacctcggtcaagcggctggccgcccag
tgctcgcagctgatcgtgtacacgccgcccggcacgcccgccgaagagcgggcctccgcc
tgggcgcagccagggcgccggcctctgcgcgctcaccacttctgtccctttttttgcgct
tcaggtatcgacctttggaaaagtctggaccgagacgcttcggaagccatgaggtggtcc
aggaacgcctcggtggacgccacggcggaagtgcagcgctacatgagcgatccgcctctg
gggagggccgaggacccgctggcttactggctcagccatcaaaacgtttacccgcatctc
ttccggttggccaaacattttctctgcacgcccgcgtccgccgttccttgcgagcgagtc
ttttccaaatgcggggaagaggtgagcaaaaagaggaatcgactcagtcccaaaagtgtc
gaaatgatcatgtacctcaataaaagtctttga
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