Hippocampus comes (tiger tail seahorse): 109529890
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Entry
109529890 CDS
T04969
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecule (CAM) interaction
hcq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109529890
04517 IgSF CAM signaling
109529890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcq04515
]
109529890
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hcq00537
]
109529890
Cell adhesion molecules [BR:
hcq04515
]
Immunoglobulin superfamily
Contactins
109529890
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hcq00537
]
Others
109529890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
C2-set_3
DP-EP
Motif
Other DBs
NCBI-GeneID:
109529890
NCBI-ProteinID:
XP_019748958
UniProt:
A0A3Q2YNV0
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MPDLSLLLYLLLLLFGSRADPSMQEEDPDFNRDEATGYGPVFEEQPVDTIYPEELLEDKI
TMSCRARASPPAAYKWRLEGVEIDLSADHKHYTLSEGNLIISFPVKNQHEGRYSCLASNK
FGTVVSREASVQFGYLDLFSSEERESVYVKEGQGAVLLCAPPPHHPADLSFRWIFNEFPT
FISLDKRRFVSQITGNLYISKVEASDSGNYSCIASSSSISKSVFSNYIPLVPLRERSIRK
YPADLNVKFPDTTTLAGQNITLECFALGNPVPEIRWRKLNGELPPNHEVRMAGAHLHLYN
VRPEDGGSYQCEAVNSKGKDYHSAHLSVEAFPVWVEHISSAEADLGSAYAMSCSASGKPE
PRVRWLKNGEPLDRNEMTFSSLTFEDSGMYQCIAENPHGVIFANAELRVFDCAPTFEHNP
VKHALAPRNGRVVMECRPKAAPKPKVLWSKDTELLSNSSRMFIWEDGSLEILNVTRTDEG
KYTCFAHNDRGKANSTGSLTVTDSTKITLAPSNADVKVGENARMQCAASHDSSLDITFIW
SLDGRVIDLDKDSQHYERSPNGSSDGELMIKSAQLKHAGIYTCAAQTTVDNVTSSASLVV
RGPPGAPAGVRVMEKSDKNVTLRWSRGADNHSPISKYTIQYRDAFFPAAWRNATTSPPDV
EGNAETATVVDLVPWTEYEFRVMATNTLGTGDPSVPSRKEKTLPSSPVVAPSDVGGGGGV
NRELTITWTPVQEQYYYGPNFGYIVVFKPRAGVEWTQVIVSDPQAKRYVHKDPSIAPATE
FIVKIQAFNSKGEGPYSQPETIYSAQDVPTDAPGSIDGKALSATEAVVWWFPITQSNIDG
YQVKYWRKKEDSEGGAHRVVVSGRENHTRVDGMKPDSLYLIEIRGYNSAGYGPASERLEI
HTKKPPPSQAPRIIGKKFKGKSVNVAWEHVATMANEAPVDGYKVLYRPQAQSTGTLYMTS
RRHIELPLFENETYVVEVRAYTEGGDGAVSQIFITGGSVMAARPLSTLGLLLVAILCLNL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgccagacctcagcctgctcctttatctcctgctactgctctttggctcccgcgcagat
ccatcgatgcaggaagaggatccagactttaatagagatgaagccacaggttacgggccg
gtgtttgaggagcagccggtggataccatctaccccgaggagttgctcgaggacaaaatc
accatgagctgccgggctcgagccagtccacctgccgcatacaaatggaggctggaaggt
gtagaaatcgacctgagcgctgaccacaaacactacacattgtcggaaggcaacttgatc
atcagcttccccgttaaaaaccaacatgaggggaggtactcctgcttggccagcaacaag
ttcgggacggtcgtcagtcgagaagcgtcggtccagtttggatatttggaccttttctca
tcggaggaaagggagtctgtgtatgtcaaagaaggacagggggcggttcttctctgtgct
cctcctccacatcatccagccgacctgtcgttccgatggatcttcaatgagttccccact
tttatctcgctggacaaaaggcgcttcgtctcgcagataacgggcaacctttacatctcc
aaagtggaggcctcggacagcggcaactactcgtgcatcgcgtccagctcctccatctcc
aagagtgtcttctccaactacatcccgttggttcccctcagagaacgttcaatcaggaag
tatccggctgacctcaacgtcaagttcccggacaccaccactctggcagggcaaaacatc
actttggaatgctttgctttgggaaaccccgtcccagagatccgctggaggaaattgaac
ggagagctgccccccaatcatgaggtgcgcatggcgggggctcacctgcatctgtacaac
gtgcggccggaagacggcggctcgtatcagtgcgaggccgtcaactccaagggaaaggac
taccacagcgcccatttgtccgtggaagcttttcctgtatgggtggagcacatcagcagc
gcagaggcagacctcggcagcgcctacgccatgtcatgctcagccagcggcaaacccgaa
ccacgcgtccgctggctgaagaacggagagccgttggacaggaacgagatgacgttcagc
agcttgacgtttgaagactccgggatgtaccagtgcatcgctgagaatcctcacggggtc
atttttgccaacgcggaactgcgtgtgttcgactgcgctcccaccttcgaacacaacccc
gtcaagcatgccctcgctccgagaaacggccgcgtggtgatggagtgtcgacccaaagcc
gcccccaagcccaaagtcttgtggagcaaagacaccgagctgctgtccaactccagcagg
atgttcatctgggaggacggcagcttggagatcctcaacgtcactcgcacggacgagggc
aagtacacctgctttgcccacaacgacaggggcaaggccaacagcacgggctctctcaca
gtaacagactccacaaagatcaccttggccccctccaacgctgacgtcaaagtgggcgaa
aacgcccggatgcagtgcgccgcgtcacacgactcctccctggacatcaccttcatctgg
tccctggacggccgagtcattgacctcgacaaggacagccaacattatgaacgcagcccg
aatggaagctcggatggcgagttgatgatcaagagcgcgcagttgaagcacgccgggatt
tacacctgcgcggcacagacgacggtggacaacgtcacctcctctgccagcttggttgta
agaggaccccccggcgccccggcgggggtgcgagtgatggagaaaagtgacaagaacgtc
acgctgcggtggagtcgcggcgcagacaaccacagccccatctccaaatataccatccag
tacagggacgccttctttccggccgcgtggaggaacgccaccacatctccaccagacgtt
gaaggcaacgccgagacggccaccgtggtggacttggtgccctggactgagtacgagttc
agggtgatggccaccaacacattgggcacgggtgacccgagcgtcccctctcgcaaagag
aaaaccctgccctcaagtcctgtggtggcgccctcagatgtgggtggaggtggcggcgtg
aacagagaactgaccatcacgtggacgcctgtccaggagcagtactactacgggccgaac
tttggttacatcgtggtctttaaacctcgagctggcgtcgagtggacacaggtgatcgtc
tctgacccgcaggccaagcgctacgtgcacaaagatccgtccatcgctcctgcaaccgag
ttcatcgtgaaaatccaagcgttcaacagcaaaggggagggaccctacagtcagccggaa
accatttattccgcgcaagacgtgcccactgatgctcctggaagcattgacgggaaagcg
ctttctgccaccgaagctgttgtgtggtggttccccatcacgcagagcaacatagacgga
taccaggtgaagtattggcgaaaaaaagaggacagtgaaggtggagcccacagagtggtg
gtgtccggcagggaaaaccataccagagtggacggaatgaagcccgactccctttacctc
atagagatccggggctataattctgcaggctacgggccggccagcgagcgcctcgagatt
cacaccaagaaaccacctccaagtcaagccccaagaatcatcggtaaaaaattcaagggc
aagtcggtaaacgtcgcctgggaacacgtggcgacgatggccaacgaggcaccggtagac
ggttacaaagtgctgtacagaccccaggcccaatccacaggcacgctgtacatgaccagt
cggcggcacattgaactccccctctttgaaaacgagacctacgtggtggaggtccgagcg
tataccgagggtggcgatggagcggtgtcccaaatcttcatcacgggaggaagtgtcatg
gccgcccggcctctcagcaccctcggcctgctcctggtggccattctctgcctgaacctc
tga
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integrated database retrieval system