Hippocampus comes (tiger tail seahorse): 109529898
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Entry
109529898 CDS
T04969
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109529898
Enzymes [BR:
hcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109529898
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109529898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
109529898
NCBI-ProteinID:
XP_019748972
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MCAECSTFCRQNRSESYPDERMEPQTKRQPGTIRRCQRGSGQPLPGEDASRADCVDQLLA
LTDALEERRSTWAQRARLLRLEGVQPPGEQLWRLHQCLVHMDSIALQLFDYYQVNGRELS
KSSHEETLESFLPAKDPVVVQVIRRTPSGRPHGPPQEIHVVDVCTQTDITFEHIVALAKL
RPTTPPVPDVCPFLLSDSCHSLHTMEQDYYEGTDYLSPLPVDADRTEELEYEEVELCRLS
NQEKLGLTLCYRTDEEEDVAIYVSEICPNSIAARDGRIREGDRILQINGQDVQDREEAMA
ALSNEECRRITLLVARPEMQLEEAWLDDEHSEFLEQLKMEMLEEQRREEMELAALQEEQE
SGQREEDDKPTCSTLTQHQDRGRILKERQDNSERNVLAHIQRRLSQCLRDNLDPRRPEGR
EDEEDNEEAAEGDRFQQLLELKCQIRNSGEYDLFYSRRSTIECSVGEPGSVQHELRMLNE
ELRSIELECQNIMQAHKLRQGQQSESPLRGEPGKGKLADINERLEKSDKDSSSAYNTAES
SRSTPLAMDRSPEHSLQRMVSLTNQRNLSSSLAAGPSLSPSPVPGCQASLLCKSSSPDHS
NPSESDHVLQPEEEGRRGKPKTRVSQIPYFSPSHSSHHRQANIPAHARHYQSYMQLIQQR
SAVEYAQSQLSLLSVCNTEPQAAPLLLDEPKMEWKVKIRSDGTRYVTKRPVRDKILRERA
LKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRKRREFMQRSRLESLKEN
PQSSGEASIIELSHKKMMKKRNKKILDNWMTIQELMTHGTKAPEGTQVHNAFLSVTTV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccgaatgctccacattttgccgacaaaaccgctcagagtcttacccggatgaa
aggatggaaccgcagacgaaaaggcaaccggggaccatccggaggtgccagcggggaagt
gggcagcctctacccggcgaggacgcctcgagggcggactgcgtggatcagctgctcgcg
ctgactgacgccctggaggagagaagatccacttgggcgcagcgagctcggctgttgagg
ctggagggtgtgcagccgccgggggagcaactctggaggctccaccagtgtttagtgcac
atggacagcattgcgctgcagctctttgactattaccaggtcaatggcagagagctgtcc
aaatccagccatgaggagacgttggagagcttcctccccgccaaggaccccgtcgtggtt
caagtcatccggcggacccccagtggccgaccccatggcccgcctcaggaaatccatgtg
gtggatgtgtgcactcagaccgacatcaccttcgaacacatcgtggcgctggctaagctg
cggcctacgacgcctcccgtgccggacgtctgtcccttcttgcttagcgacagctgccac
tccctacacacgatggagcaggattactacgaaggcaccgactacctctcgccacttccc
gtcgacgctgacaggacggaagagttggaatatgaggaagtggaattgtgccgactcagc
aaccaagaaaagctgggcctgactctgtgctacaggacggacgaggaagaggacgttgcg
atctacgtcagcgagatctgtcccaacagcatcgccgccagagacggtcgcatccgagag
ggggaccgcatattacagattaatgggcaggatgtgcaggaccgcgaggaggccatggct
gcgctgtcgaacgaagagtgccgcagaatcaccctgttggtcgccaggcccgagatgcag
ctggaggaggcctggctggatgacgagcacagcgagttcctggagcagctcaagatggaa
atgctggaggaacagcggcgcgaggagatggagttggccgccctccaggaggagcaagag
agcggacagcgggaagaggacgacaagcccacctgctccaccctcactcagcatcaggac
aggggccggatcctgaaagagagacaggacaattccgagcgcaacgtcctggcgcacatc
cagaggcgcctgtcgcagtgtctccgggacaacctggacccgcgccgcccggagggccgg
gaggacgaggaagacaacgaggaggcggcggagggcgatcgcttccagcagctcctggag
ctcaagtgccaaatccgcaacagtggcgagtacgacctcttctacagccggcgtagcacc
atcgagtgtagcgtgggcgagccgggcagcgttcagcacgagctgcgcatgctcaatgag
gagctgcgcagcatcgagctggagtgccagaacatcatgcaagcgcacaagcttcgccag
ggccagcagtcggagagtccccttcgaggggaacccggcaaaggcaagctggcggacatc
aacgagcggctggagaagtcggacaaggacagctccagcgcttacaacacggccgagagc
tcccggagtacccctctggctatggatcgctcccctgaacattccctccaaaggatggtg
agcctcaccaatcagcggaacctcagcagcagcctcgccgccggaccgtcgctcagtccc
agccccgtcccgggttgccaggcgtcgcttctctgtaagagcagcagcccggaccacagc
aatccgtccgagtcggaccacgtgcttcaacccgaggaggaggggcgacgagggaaaccc
aagacccgggtgtcgcagatcccttacttctccccatcgcacagttcgcatcatcggcag
gccaacatcccggcccacgcccgccactatcagagctacatgcagctcatccagcagcgc
tcggcggtggagtacgcccagagccagctcagcctgctcagcgtgtgcaacacggaaccc
caggcggcgcctctcctcctggacgagcccaagatggaatggaaggtgaagatccgcagc
gacggcacgcgctacgtcaccaagcggccggtgcgcgacaagatcctgcgggagcgagcg
ctgaagatcaaggaggagcgtagcggcggcatgaccacggatgacgacgccatgagcgag
atgaagatgggccgctactggagcaaggaggagaggaagcagcacctggtgcgcgccaag
gagcagcgcaagcgccgcgagttcatgcagcgcagccgcctggagagcctgaaggagaac
ccgcagagcagcggcgaggccagcatcatcgagctgagccacaagaagatgatgaagaag
cgcaacaagaagatcctggacaattggatgaccatccaggagctgatgacgcacggcacc
aaagcgcccgaagggacgcaggtgcacaacgccttcctgtcggtcacgactgtgtga
DBGET
integrated database retrieval system
