KEGG   Hippocampus comes (tiger tail seahorse): 109530074
Entry
109530074         CDS       T04969                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hcq01009]
    109530074 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hcq03036]
    109530074 (kdm5a)
Enzymes [BR:hcq01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     109530074 (kdm5a)
Protein phosphatases and associated proteins [BR:hcq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109530074 (kdm5a)
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109530074 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5 KAR
Other DBs
NCBI-GeneID: 109530074
NCBI-ProteinID: XP_019749158
LinkDB
Position
Unknown
AA seq 1725 aa
MSAIGEFVPPPECPVFEPSWEDFSDPLGFINKIRPVAEKTGICKIRPPQDWQPPFACDVR
HFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGCKIRFPHVERKVLDLYQLSKVVSS
EGGFVTACKEKRWSKVSSRMGFPPGKGTGSLLRSHYERILYPYELFQSGATVTGIQQLYE
EGDDFEEVDEGVGEEAVEEDDPEENEDKDGEVGAAQMKERPLAERRSRRLKSERENKEPK
GLKLFAASPKLVDLEIVSADDGYKKHRHLKAQAFAIKMRPRKETLEVNFIDLYFCLMCGR
GDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQAVREY
SLQSFGEMADQFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDVGSG
FPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGMCFSSFC
WHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFQSQPDLLHQLVTIMN
PNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGRQCVAH
YRRLRRYCVFSHDELLCKMAADPESLDVELAAAVVKEMGEMMDEETQLRNTIQEMGVLSS
EQEVFELVPDDERQCHKCKTTCFLSALTCSCCPDRLVCLHHAADLCDCPLSNKCLRYRYD
LEELPAMLQGVKNRAQSYDTWAKRINEALAADQKNKKDLIELKVLLEDAEDRKYPENSLF
RRLREMVKEAETCSSVAQMLLSRKQRHSSRLRSESSRTRSKLTVDELKAFVEQLYRLPCI
ISQARQVKELLENVEDFHERAQVALADELPDSSKLQALLDLGSGLDVELPELPRLKQELQ
QARWLDEVRITLTEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSEKWEDKA
RACLQARPRHSMVTLESIVLEARNIPAYLPNILALREALQKAKDWTAKVDAIQSGSSYAY
LEQLESLLARGRSIPVRLDPLAQVESQVASARAWRERTGRTFLKKNSTYTLLQVLSPRVD
IGVYGNSKSKRKRVRELMEKERGGFDPDILSDLDESLDEARDPSTVVAAFKAKEQKEVEA
IHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGVCVPLPKTGTQKKL
GAGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQ
DRARRALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHIQTFQ
QSGFSRATSPRQSVDYDDEETDSDEDIRETYGYDTKDSGEVKPYLFCDDEIPVKSEEVVS
HMWPSATPSFCAEHAYSSASKSVVQNVGTPRKQPRKTPLVPRSLEPPVLELSPQAKAQLE
ELMMLGDLLEVSLDETQHIWRILQATHPPLEERFLQVMEPDDGPMEKSLKIKIKDSEKKR
KRKLERAEHHHHHHMLMSSAGARPSKSKELKRAGQELGLGGKPKKKKLKLGLDKNREMKQ
LAKRLAKEEKERKRKEKAAAKAEAIREGLEKRKEKKILDIPSKYEWSGAEDSNDENAVCA
AKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICVDCSLKAVGPRRGGGA
AEVEVAEETLVVLATPSLLTAAGASWSRPAATVRLTPAEDPQQNS
NT seq 5178 nt   +upstreamnt  +downstreamnt
atgtctgcaatcggcgagtttgtgcccccccctgaatgtcccgtttttgagccaagttgg
gaggatttctcggaccctcttggatttatcaacaagatccgacccgtcgccgagaaaact
ggcatctgcaagatcagaccaccgcaggactggcagcctccgtttgcgtgcgacgtgcgt
cacttccggttcactcctcgcgtacaaagattgaatgaacttgaggcactcactcgggta
aagctcaacttcctggatcaaatagcaaagttctgggagctgcaaggatgcaagattcgt
ttcccacacgtggagcgaaaggtcctggacctgtatcaactcagcaaggttgtgtcatcc
gaagggggctttgtgaccgcgtgtaaagagaagaggtggtccaaagtgagcagccgaatg
ggcttcccgccagggaaaggcaccggctcactcctgcgctcccactatgagaggatcctt
tacccctatgagctcttccagtcgggggccactgtaaccggcatccagcaactatacgag
gagggagacgactttgaggaagtggatgagggagttggcgaggaggcagtggaggaggac
gacccagaggaaaacgaggacaaagatggagaggttggtgcggcgcagatgaaagagcgt
cctctggccgaaagacgctcgaggcgacttaagtcggagagggaaaacaaagagcccaaa
ggcctcaaactgtttgctgccagtcccaagttggtggacttggaaattgtgtcggcagat
gacggctacaagaaacatcgtcacctcaaagctcaagcctttgccatcaaaatgagaccg
cgcaaggagacgctcgaagtcaactttatcgacctctacttctgtctgatgtgcggacgt
ggcgacgaggaggaccgcctgctgctgtgcgacggctgcgacgacagctaccacaccttc
tgcctgattccacctctgcaagatgtgcccaaaggtgactggcgctgccccaagtgtgtc
gcagaggagtgcagtaagcccagagaggcgtttggctttgagcaggctgtgagggaatac
tcgctccagagcttcggagagatggccgaccagttcaagtcggactatttcaacatgccg
gtccatatggtgcccaccgagctggtagagaaagagttctggcgcctggtgagcagcatc
gaggaggacgtcatcgtggaatacggcgccgacatcagctcgaaggatgtgggcagcggg
ttccccgttagagacggcaagaggaggctcctgggagatgaggaagagtacgccaactcc
ggatggaatctgaacaacatgccagtgctggagcagtcggtcctcacgcacatcaacgtg
gacatctcgggcatgaaggtgccctggctctatgtcggcatgtgtttctcctccttctgc
tggcacatcgaggaccactggagttactccattaatttcctccattggggcgagcccaag
acttggtatggagtgccagcgtccgcagcggagcagctcgaggcggtgatgaaaaagttg
gctccggagctgtttcaatcgcagccggacctcctccatcagctggtcaccatcatgaac
cccaacgtcctcatggagcacggcgtgcctgtgtacaggaccaatcagtgcgcaggggag
tttgtggtcacctttccgcgagcctaccacagcggattcaaccagggctacaattttgca
gaggctgtgaacttctgcaccgctgactggttaccaatgggccgtcagtgcgtggcccac
taccgacgccttcgccgctactgcgtcttctcgcatgacgagctgctttgcaagatggcc
gctgatccggagagcctggacgtggagctggccgcggccgttgtcaaggaaatgggggaa
atgatggatgaggagactcagcttagaaacacaatacaagaaatgggggtgctgtcttct
gagcaagaagtttttgagctggtcccggacgatgagcgccagtgccacaagtgcaagacc
acctgcttcctgtcggcgctcacctgctcttgttgtcccgatcggctggtttgtctccac
catgcagcagatctctgcgactgccctctcagcaacaagtgtctcaggtatcgctacgat
ctggaggagcttccggctatgctgcagggtgtgaagaatcgtgcgcagtcatacgacacc
tgggcaaaaaggatcaatgaagccttggctgcagatcagaagaacaagaaagacctaatt
gagctcaaggttttgctggaggacgcagaagacaggaagtacccggaaaattctctgttc
cgtcgcctcagagaaatggtgaaagaggccgagacttgctcctctgtcgcccagatgttg
ctcagccgcaagcagagacacagcagccgcttacgttctgagagcagtcggacccgcagc
aagctgactgtggacgagctcaaggcctttgtggagcagctttacaggctgccctgcatc
atcagccaggccagacaagtgaaggagttactggagaacgtggaagacttccacgagcga
gcccaagtcgcgttggccgacgagctgccggattcctccaagctgcaggcccttctggac
ctgggcagcggcctggatgtggagctgccggagcttcctcgcctcaaacaggagctccag
caggcccgttggctcgatgaggtgcggatcaccttgacggagcctcaccgtgtcaccctg
gagctgatgaagcggctcatcgattccggggtgggcctggctccccatcacgccgtagag
aaggcgatggctgaactgcaggagatcctcacggtctctgagaaatgggaggacaaggcc
cgggcttgcttgcaggccaggcctcgacacagcatggtgacgttggaaagcatcgtgctg
gaggccaggaacattccagcatacctcccgaatattttggctctacgagaagccctgcaa
aaagccaaagactggactgccaaggtggatgctattcagagcgggagtagctacgcttac
ctggagcaactggagagcctactggctcggggccgctctatccccgtccgtctcgatccg
ctggcccaggtggagtctcaggtggcctcggcgcgagcctggagggagaggactggccga
acctttctcaaaaagaactcgacatacacgctactccaggttctcagtcctcgcgtggac
atcggcgtgtacggcaacagcaagagcaagcggaaacgagtgagggagctcatggagaag
gagcgaggaggcttcgaccccgacatcctgagcgacctggacgagagcctggatgaggcg
cgagacccctccaccgtcgtcgccgccttcaaagccaaagagcagaaagaggtggaggcc
atccactcgctgcgcgccgccaacctggccaagatggccatggccgaccgaatcgaggaa
gtcaagttctgcctctgccggaagacggccagcggcttcatgctgcagtgcgagctgtgc
aaggactggttccacggcgtgtgcgtgcctctgcccaagacgggaacgcagaagaagctt
ggcgccggttggcagagcaatagcaaggactccaaatttctctgcccgctgtgtcaacga
tcgaggcggcccaggttggagaccattctgtctctgctggtgtcgctgcagaagcttccc
gtcagactaccagaaggggaggccctccagtgtttaactgagcgggcaatgagctggcag
gaccgggcccgccgagctctggccacagaggaactgtcgtccgccctggccaagctgtcc
gttttgagccagcgcatggtggagcaagccgcacgggaaaagacggagaagatcatcaac
gccgagctgcagaaagccgcagccaacccagacttgcagggtcacatccagaccttccag
cagtcaggcttcagcagagccacgtcgcctcgccagtctgtggactacgacgacgaggag
accgactcagatgaggacatccgggagacgtatggttacgacacaaaggactcgggcgaa
gtaaagccgtacctcttctgcgacgacgagatcccagttaagtcagaagaggtggttagt
cacatgtggccgagtgccacgccctccttctgcgccgaacacgcctactcctcagcttcc
aagtctgttgtgcaaaatgtgggaacgccaagaaagcagcccaggaagactcctctggta
cctcgcagtctggagccgccggtgctggaactgtctccgcaagccaaggcccagctggag
gagctgatgatgctgggcgacctgctggaggtgtctctcgatgaaacccagcacatctgg
aggatcctgcaggccacgcatccccccttggaggagagattccttcaggttatggagcct
gacgacggtccaatggagaagtctctgaaaatcaagatcaaggattcagagaagaagaga
aagcggaagttggagcgagccgagcaccaccaccatcaccacatgctcatgtcgtccgcc
ggcgcccggccgtccaagtccaaggagctgaaaagggccggccaggagctcggcctcggg
ggcaaacccaagaagaagaagctgaaactgggtctggataagaaccgagagatgaagcag
ctggctaaacgtttagccaaggaggagaaagagaggaagcggaaggagaaagcggccgcc
aaggcagaggccatcagagagggactggagaagaggaaggagaagaagattctcgacatt
ccctccaagtacgagtggtccggtgccgaagactccaacgacgagaacgccgtgtgcgct
gccaaaaactgccaaagaccgtgtaaagacaaggtggactgggtgcagtgcgacggcggc
tgcgacgagtggttccaccaagtctgcgtgggggtctcgtgcgaaatggcggagaacgaa
gactacatctgcgtggactgctccctcaaggccgtcgggccgaggcggggaggcggcgcg
gccgaggtggaggtggcagaggaaaccttggtggtgctggccacgccgagcctgctgacg
gccgccggcgcctcgtggtcccgccccgccgccaccgtccgtctaacgccagcggaggat
cctcagcagaacagttag

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