Hippocampus comes (tiger tail seahorse): 109530724
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Entry
109530724 CDS
T04969
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109530724 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109530724 (ttc37)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
109530724 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_11
TPR_17
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_12
TPR_9
ANAPC3
ChAPs
TOM20_plant
ARM_TT21_C
TPR_15
TPR_COPA_B
COG4_N
YceG_bac
Motif
Other DBs
NCBI-GeneID:
109530724
NCBI-ProteinID:
XP_019750196
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSSKEVKAALKSAKEAIKSKEFKEALKHCKTVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYRKAVELEPEQLLAWQGLSNLYEKTDQWDFKIELPNVYQKLVELYASSDKNKCYEVIG
KLQEIHQSDKEYSKLAKVWLQLIQLRQDDGADKKALLQLWRQMAQLLSNCLTDNEQDTET
QKHLSTAFEKAMALVEPTPGEEHRKLSVDYIKCLSKLPEEEDKMKQACESMLSLYPAQSY
PLEVLCSHYLQKGVQSEEAVNCLSRLRNLVPDNAWCNLGFGTKALQEGRYNDAIQDLAQG
LKKMNFHPAWHSLAEAQLKVHKYSDCSKSCAQGLKVCVPGDKELRIRLLKLRLEALVRSA
EEKDAEQALETFSWIPDADKDPLLVALKGRAYLNKGKVFEALKVSSQLAASNPHLAQASA
LEGLAHVAEDKKQLAEQSFLKASAQSPDCAEYFFLLGQLYWTMGEETRKDRSKAHSHFLK
AAKLDPYFGCVFRYLGHYYREVANDSGRARGCYRKAFDLDNNDAESGAAAVDLSMANEDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKIGQHHLAIADLQAALRADPDDWVCWECL
GEAYLNRQSFTAALKAFGKAHILQPTSIYSVYQAAAIKQTLGKFKEAVAEYLQITAKHDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIEQALLNLFKAVKLRSDLSCLWKLLGDACS
AVSTVSPKRAQVRMPAALAGLDPQVQVHVLNQAETLRVGERCYTRALKLMPEVASLWHDL
GLNFYHQARLTCDAEEAQSLLLEKAQQCLRKAVMMDGGNHNYWNALGVINTSKGLENLAL
AQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHESFKIAQSLEPLYVNCWIGQALIA
ETVGSYDTMDLFRHTTELSTHTEGVKGYAHWVCSTLLDKSKRDSELYRYNIIQMNAISAA
QVALSKYTERIQSDAVAFIMLGFLAEHLQLKRQAVQAYHRAVELLESTSFGEQLSFARSN
YARALCACGRWREAVDVFNSTPLEELSDLSGLALAYCKAGLIPESIGAYERALAAASSEK
QTAYVLTALALLQHQQGNVDSAKTLLFKCSMLKEPAPESLLCLCALGLVHNDTTLAAAAR
TELLKQGSSCATVIEQRCLLTCTLLALQGNYSAVQREASRAVHSYPGNSSLWSLLSKLVP
KYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLACGRHSGEDAHRNALKTMQRAVL
LCPDDPAAWAGLMAACHTENTSCYLSGSAARRQGLEQTLMSVVSEKVHSLEEIERSLAQS
LQGWVLQQAVSGLMLSGHLEQAEAVCSQVLNVSPEHPAATLSLRQVQCLRLLESGDGTLL
SESALEQLNSAVMLNPNNIAAWHWLAAVYISQGLLVQAVMVLRQSLQLASQLGQHSSQVG
SLLRLSLLALRPSMAGVPGNDWKDLVRQATTEALKLGSSPVALLFQALLQFVTKMAARET
RRLLEKLVYSPSQEFSATVPQVASWYLLRHLHFKNDDELIHVLLEHAKLNGDQRLLDFHS
QLVSLS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaagaagtgaaagccgccctgaagagcgccaaagaggctataaaaagcaag
gagttcaaagaggcgttgaaacattgcaagactgttttgaagcttgaaaaaaacaattac
aatgcctgggtgttcattggcctggctgccagcgagctggagcaaccagatcaggcacag
acggcctacaggaaggctgtggagctggagccagagcagctactggcatggcagggcctg
agcaatttatacgagaagacggatcagtgggatttcaaaattgagctccccaatgtctac
cagaagcttgttgagctgtatgcaagctcggacaaaaacaagtgctatgaagtgattgga
aagctgcaagaaatacatcagtctgacaaagaatattccaagttggcaaaggtgtggctg
cagttgattcaactcagacaggacgatggtgcagacaaaaaagccttactgcagctatgg
cgacagatggcccagctcctgtccaactgcctcactgacaatgagcaggacaccgaaact
caaaagcacttaagcacagcttttgagaaggccatggctctcgttgagccgacgcctgga
gaagaacaccgaaagctctctgttgactacatcaaatgtctctccaagctgcctgaagag
gaggacaaaatgaaacaagcgtgcgagtcaatgctgtctctctacccagcccaaagttat
cctcttgaagtcctttgttcccactacctccaaaaaggtgtccagagtgaggaggctgtc
aattgcctttcacggcttcgtaatttggtgccggataacgcttggtgtaatttgggattt
ggcacgaaagcactgcaagagggcaggtataacgatgccattcaggaccttgcgcaagga
ttgaagaaaatgaactttcacccagcgtggcacagtctggccgaggctcagcttaaagtg
cacaaatattcagactgctctaaatcgtgtgcccaaggtttaaaagtgtgcgtgcctgga
gacaaggaactgaggatccgactgctaaagcttaggcttgaagctttggtcaggagtgca
gaggagaaggatgcagagcaggctctggagacattttcctggatccctgatgctgacaaa
gacccattactagtcgcccttaaaggtcgcgcatacctcaacaaaggaaaagtatttgag
gcgttaaaggtgtcatcacagctggcggcctcgaaccctcacctggcccaggcgtcagcg
ctcgagggactggcccacgtagccgaggacaagaagcagcttgcagagcagagtttcctc
aaggcatccgcgcaaagccccgactgcgccgagtattttttcttgcttggccaactctat
tggaccatgggagaagagacccgtaaggacagaagcaaggcccattcacattttctcaag
gctgcaaagttagacccttacttcggttgcgtgttccgctaccttggacattattatcgg
gaagtggccaacgactccggacgggcacgcggctgctatcggaaggcctttgacttggac
aataacgacgctgagtctggcgcggctgcagtcgatctcagcatggctaatgaagatatg
gacaccgcattggcaatcctccagtcagtgatcgagaaggccactccaggctctgccaaa
tgggcctggatgagacgcggcctttactacttaaagattggacagcatcatttggctatt
gccgatctccaggcagctctgagagcagacccggacgattgggtgtgctgggagtgttta
ggtgaagcatacttaaaccgccagagttttacagcagctctgaaggccttcggaaaggcg
cacatccttcagcccacctccatctacagcgtctaccaggccgctgccatcaaacagacc
ctaggcaagttcaaagaggccgtcgcggagtatttgcagatcacagcgaagcacgactac
gtccctgcccttaaaggtcttggtgagtgtcagctctcgctggcaaaaagtttaatggag
gactgcagagacggtggagccattgacttgattgagcaagctctcctgaacctcttcaaa
gcggtgaagctgcgatctgacttgtcctgcttgtggaagctgctgggagatgcctgctcc
gctgtcagcacagtgtctccaaagagggctcaggttcggatgccggcagcgctggctggt
ctggatccacaagttcaggtccacgtgctgaaccaggctgagacgctcagagttggcgaa
cggtgttacactcgtgcattgaagctcatgccagaggttgccagtctgtggcatgatctg
ggactcaatttttatcatcaggctcgcctaacctgtgatgcagaggaggcgcaatcgtta
ctactagagaaagcacaacaatgtttacgaaaggcagttatgatggacggcggcaaccat
aactattggaacgctttgggagtgatcaacacaagcaaaggactggagaatttggccctg
gctcagcattgcttcatcaagtctattcaagttgaaccaaataatgttgttgcatggacc
aacctcggcaccttgtatctgaaaaaggacaatatagagcttgcacatgagtccttcaag
atcgcacagtcattggagccgctgtatgtcaactgctggattggacaggccctgatagca
gagacagtgggaagctatgacaccatggatcttttcagacacaccactgagcttagcaca
catacggagggagtgaaaggctacgcccactgggtatgttctaccttgttggataagagc
aagagagactccgaactgtatcgctacaacataatccagatgaatgccatctctgcagcc
caggtggcactcagcaagtacaccgaaaggatccagtctgacgccgttgccttcatcatg
ctgggctttctggctgaacatctgcagctgaagagacaggctgtacaggcttatcacaga
gccgttgagttacttgagtccacgtccttcggagaacaactatcgtttgctcggagcaac
tatgctcgagctttgtgtgcttgtggccggtggcgcgaggcagttgatgtttttaactcc
actccgctagaggagctcagtgatctgtcagggctggctctggcctactgcaaggccgga
ctcatacccgagagcatcggcgcatatgagcgtgccctggctgcggcctccagtgagaag
cagacggcgtacgtgttgacagctcttgccctgctgcagcaccagcaggggaatgtcgac
tctgccaagaccctgctgttcaaatgctccatgttgaaggaaccggcaccagagtctctt
ctgtgtttatgtgcccttggattggtccacaatgacacaacgttagccgctgctgcccgt
accgagctgctaaaacaaggctcgtcctgtgcaactgttatcgaacagcggtgtcttctc
acctgcaccttactggcgttgcagggcaactacagtgctgtgcaaagagaggcctccagg
gccgtacacagctatccggggaattcatctttgtggtcgctattgtccaaactggtaccc
aagtactaccccaggaaggcaaatggcggcgcaatggccggacacgttgcctgtctttcc
agtatgacccagggaaagagagcgctgctgtacagtggagtgaatcagttggcttgtgga
agacactctggagaggatgctcacaggaatgctctgaagaccatgcagagagctgtgctg
ctctgtcctgatgatccagcagcatgggcaggattaatggctgcctgtcacacagaaaac
acttcctgttatctttcgggctcagctgcacgtaggcaaggactagagcaaacgctcatg
tcagtggtttctgaaaaagtgcatagcttggaagagatagagcgctccctagcacaatct
ctgcaaggatgggtactacaacaggcagtgagtggtctcatgctgagcggacatcttgag
caagcagaagcagtctgctcacaggtgctaaatgtgtccccagagcatcccgcagcgacg
ttgtcgctcagacaagtacagtgtctgcgcctccttgagtccggcgatggtactctccta
tcggagtctgccttggagcagctcaacagtgctgtgatgttgaaccccaacaatattgcg
gcgtggcattggttagccgcggtgtacatcagccagggtctgctcgtgcaggcagtcatg
gttctcagacagagtttgcagctcgcctcccagctcggccagcacagcagtcaagtcggc
agcctgctgcgtctcagccttcttgccctgaggcccagtatggcaggtgtccctggaaat
gactggaaggatctggttcgacaagctaccactgaagccttgaagctgggctcttcacct
gtggctctcctcttccaggccttgctccaatttgttaccaagatggctgccagggaaacc
aggcgactgttggaaaagctggtctacagcccctctcaagaattctctgcaactgtgccg
caagtggccagctggtacctgctgaggcacctgcatttcaaaaacgacgacgaactaatt
catgtacttttggagcacgctaaactgaacggggatcaacgattgctggactttcattca
cagcttgtttctttgtcttga
DBGET
integrated database retrieval system
