Hippocampus comes (tiger tail seahorse): 109530844
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Entry
109530844 CDS
T04969
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
hcq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109530844
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109530844
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcq01009
]
109530844
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109530844
03036 Chromosome and associated proteins [BR:
hcq03036
]
109530844
Protein phosphatases and associated proteins [BR:
hcq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109530844
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109530844
SWI/SNF complex
109530844
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109530844
PBAF complex
109530844
SWI/SNF complex
109530844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
109530844
NCBI-ProteinID:
XP_019750316
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MATTLACCLAVLNNALAYLPFISVGGNNEQKVLSITELEKKQTHTSLAAMQLALSKTFGQ
KPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKIVASSHATSV
TLLKASECEEIFEGNDDKYKAVSISTEPPAYLREQKAKRSSQWVPTLPNSSHHLDAVPCS
TTINRNRMSRDKKRTFPLCFDDHDPAVIHENAAQVEVLVPIRLDMEIDGQKLRDAFTWNM
NEKLMTPEMFAEILCDDLDLNPLTFVPAITSAVRQQIESYPTDSILDEQADQRVIIKLNI
HVGNISLVDQFEWDMSEHENSPESFALKLCSELGLGGEFVTTIAYSIRGQLSWHQRTYAF
SENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPSW
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacgttggcatgttgtttagccgtgctcaacaacgcgctagcatatcttcca
ttcatatctgtggggggcaacaatgagcaaaaggtgctcagtatcacggaactcgagaag
aagcaaacacatacatctctcgcagcgatgcagttggctctaagtaaaacatttgggcag
aagccagttaaatttcagttagaacaagatggggacttttacatggttggttcggaggtt
ggaaactatctgcgtatgttcagaggttctttatacaaaagatatccatctttatggagg
cggctggcttcagtagaagagagaaaaaaaattgtagcatcatctcatgccaccagtgtt
actctactgaaggcatctgagtgtgaggagatcttcgaaggtaacgatgacaaatacaag
gcagtgtctatcagcacagagccaccggcatatctcagggagcagaaagccaaaagaagc
agtcaatgggtcccaacgcttcccaacagctcccaccatttagacgccgtgccttgttcc
actaccatcaaccgcaacagaatgagtcgagacaagaagaggactttcccactgtgcttt
gatgatcatgatcctgctgtgattcatgagaatgctgcccaagtggaggtactggttccc
atccgccttgacatggagatagatggacaaaaactcagagatgccttcacatggaacatg
aatgaaaagctgatgaccccagagatgtttgcagaaattctgtgtgatgacttggacctg
aatcctctgacctttgtccctgccatcacctcagccgtacgtcagcagattgagtcatac
cccactgacagcattttagatgagcaggcagaccaaagagtcatcatcaagctcaacatc
catgtgggaaacatctcacttgtggaccagtttgaatgggacatgtcagaacatgaaaac
tcccccgagtcctttgcactgaagttgtgctcagaactaggtcttgggggggaatttgtg
acaacaattgcctacagcattcgaggacaacttagctggcaccagagaacatacgccttc
agtgagaacccactcccaacagtagagattgccattcgtaacacaggtgatgcagaccag
tggtgtcccctgttagagacactcacagatgctgaaatggagaagaagatccgagaccaa
gacagaaacacaagacgtatgagacgactggccaacactgctccatcctggtag
DBGET
integrated database retrieval system
