Hippocampus comes (tiger tail seahorse): 109530943
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Entry
109530943 CDS
T04969
Name
(RefSeq) spermatogenesis-associated protein 13-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109530943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109530943
Membrane trafficking [BR:
hcq04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109530943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_9
PH
SH3_2
Motif
Other DBs
NCBI-GeneID:
109530943
NCBI-ProteinID:
XP_019750462
UniProt:
A0A3Q2Y5A3
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MSTAEPKDRVSSISEDSFPRLPSSGIVDPPIRSRPFSDSYPFHGQPERSFAPYLQPVTVG
PASTDEGHPNGVGDSSSGKPGSSRIMRLFSSSRKGSFPATDGPAALPALGMVDSFKKLRT
SVLHGIQTRGASGPAPPSGGEAENGHALSDAAAEYPSKGNLTASRYDSDIDDDEDITEGL
QRNSRFSRSMRKAYGAGRITMSDMDEESHAAGCTDHKKAKINGQAENASNATVLSRLSKS
ADNLQVFKIPFRRKAPTPSPQPPPQRTTTSNGTPNIQRTSSASSVDLGSLRRSPVRVKGQ
MLKLMGSITDVNVLRRPSRSPSPGPPVPMSPLSRLHDDYSRRVPCRSTSERRRRPSPVRP
RVLSAGHTPLVHAPLVHAPPKEDAATLQHQISTEDGSLEITTCGFVSEDQLPPDDRKAEP
QNEVTAEEQREEALQPDGDSSETSGSASPLSPVFIPESPTSAPTEATAVKSRRRGGRPRP
RPISDYGQLLSRKHCIPEEVGELNPDERTHPLHPECIGNGVCESGDECGVNGNVPGTRQQ
RPVSVMGVENLYSPDADEDQLPSPLSRPPIPSHQVPPYKAVSARLRAPTLSQSTPIGLDR
VGRRKLHRVLSDGVSKGSAALDDSVSEEEEEEGSFDELADVTPYLEPGVELSVLVEWINS
GHAVYAEALWDHVTMEEQELAFKAGDVIRILDASHKDWWWGRGPDKEAWFPSSFVRVRVN
QEDSSAGSVESVADQEDPAPRETHSSQHRQQMRTNVVQEIMNTERIYIKHLKDICEGYIR
QCRKHPEMFNELQLKTIFSNIEDIYKFQRQFLRDLEKKYNKEQPHLSEIGSCFLLQGEGF
SIYSEYCNTHPAACAELQRLMKSGRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPL
QLGELLKYTPKDHRDHGGVSDAYEAMKNVASLINEKKRRLESVDAIAHWQVAILRWEGPD
VLVRSSELIHSGELTRILRQGKMQQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDLTE
VLDVPDGRDPGLGLTLRNAVRLRHADTLEFVCVLCCRKLQDKERWLQAFSKERQRVKEDQ
EMGIEISEEQKKQSIANARRAKQGKMHTVGYSGSVPPHHQNLHPLHQRHVTIPTSVPQQQ
VFALAEPPKRKPYQLLYSITRSTFFRK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggcagaaccaaaggacagagtctcgtctataagcgaagactctttccctcgc
ctcccctcctccggcatcgtggaccccccgatccggagtcgccccttcagcgactcgtac
ccgttccacggtcaacctgagaggagcttcgccccgtacctgcagcccgtcaccgtgggc
cccgcctccacggacgagggccacccgaacggcgtgggcgactcctcctccgggaagccc
ggctcctcgagaatcatgaggctgttctccagctccaggaagggctcctttcccgcgacc
gacggtcccgccgctctccccgcgctcggcatggtggactcttttaaaaagttgcgcacc
tccgtgcttcacgggattcagactcgcggcgcaagcggacccgcgcccccgtcgggtggc
gaagcagagaacgggcacgccctcagcgacgccgccgccgagtacccgtcgaaaggaaat
ttgacggcgagtcgctacgactcggatatcgacgacgacgaggacatcacagagggcctc
caacgcaattcccgcttctcgcgaagtatgaggaaagcgtacggagcgggacgcatcacc
atgtcggacatggacgaggagagccacgcggcaggttgcaccgaccacaagaaggcaaag
atcaacgggcaagcggaaaacgcatcgaatgcaaccgtgctgagccgactgagcaagagc
gcggataaccttcaggtttttaaaatcccgttccggcgcaaggcccccacgccgtcccct
cagccaccccctcagaggaccacaacgtcaaacgggactccgaatatccagagaacctcc
agcgcctcctcggtggacctcggcagtctcaggaggagcccggtaagagtgaagggacaa
atgctgaagttgatgggcagcattaccgacgtgaacgtcttgcgccggccgagtcgctcc
ccctcgccgggaccgcccgttcccatgtcgcccctgagccggctccacgacgactactcc
cgacgcgtcccttgccgcagcacgagcgaacgacggcgccgaccctcacccgtcagacct
cgggtcctgtcggccgggcacacgccgctggttcacgctccgctggttcacgcgccgccg
aaagaggacgctgccacgctccagcatcagatttccacggaagacggatccctggagatt
accacctgcggttttgtgtcggaagaccagttgcctcctgatgatcgaaaagccgagccg
caaaatgaggtcacggcggaagagcaaagggaggaagcgttgcaaccagatggcgactcc
tcggaaaccagcggcagcgcctctcctctctctccggtcttcatcccggaatcgcccacg
tcggcccccacagaagccaccgccgtcaaatcccggcgacggggtgggcgcccgaggccg
cggcccatctcggactacgggcagctcctctccagaaagcactgcatccccgaagaggtg
ggcgagctgaaccccgacgaaaggacgcacccgctccatccggaatgtatcgggaacggc
gtgtgcgagagcggcgacgagtgcggcgtgaacgggaacgtgccaggcacgcggcaacag
cgtcccgtctccgtcatgggggtggagaacttgtactcccccgacgccgatgaggaccaa
cttccttctcctctgtcacggccgcccattccctcccaccaggtgcccccctacaaggca
gtctcggccaggttacgcgcccccaccctctcccagagcacccccatcgggctggaccgc
gtgggcaggagaaaactgcaccgagtgctcagcgacggcgtgtccaaaggctcggcggcg
ctggacgacagcgtgagcgaggaagaggaggaggaggggagcttcgacgagctcgccgac
gtcacgccgtacctggagccaggcgtggagctttccgtgctcgtggagtggatcaactcg
ggccacgccgtgtacgctgaggccctgtgggaccatgtgaccatggaggagcaggagctg
gcctttaaggcaggcgacgtaatccgcatcctggatgcctcgcacaaggactggtggtgg
ggcagggggcccgacaaggaggcctggttcccctcaagctttgtccgggtgcgcgtgaac
caggaagactccagcgcggggagtgtggagagcgtggccgaccaggaggacccggctccc
cgcgagacgcacagcagtcagcacaggcagcagatgaggaccaacgtggtgcaggagatc
atgaacacagaacgcatctacatcaagcacctgaaagacatctgcgagggttacatccgt
cagtgccgcaagcacccggagatgttcaacgagctccaactaaagaccatcttcagcaac
attgaggacatctacaagttccaaaggcagttccttcgcgacttggagaaaaagtacaac
aaggagcagcctcatctcagcgaaatcggctcttgctttctcttgcagggcgagggattt
tcgatctactctgagtactgcaacacccacccggcggcctgtgccgaactgcagcgcctc
atgaagtctggccggtacaagcacttctttgaggcctgccgcctcctgcagcagatgatt
gacatctccatcgccggcttcctgctcactcctgtccagaagatctgcaaataccctctg
cagctgggggagctgctcaagtacacccccaaagaccacagggaccacggcggtgtgagc
gacgcctatgaggccatgaagaacgtggcgagtctgatcaacgagaagaagcggcggctg
gagagcgtggacgccatcgcccactggcaggtggccattctccgctgggagggacccgac
gtgctggtgcgcagctccgagctgatccactctggagagctgactcgaatcctccgccag
ggcaaaatgcagcagcgcagcttcttcctgttcgaccaccagctggtcttctgcaaaaag
gacgtcctgcgccgggacctcctccactaccgagggcggctggatatggacctcaccgaa
gtgctggacgttcccgacgggcgggacccgggcttgggtctgaccctgaggaacgccgtg
cgcctgcgccacgccgacacgcttgagtttgtgtgcgtgctgtgctgtcggaagctccag
gacaaggagaggtggctgcaggccttcagcaaggagaggcagcgggtcaaggaggaccag
gagatgggaatagaaatcagtgaggagcaaaagaagcagtcgattgcgaacgccagaaga
gcaaaacagggcaaaatgcacactgtgggctactccggctccgtgcccccgcaccaccaa
aacctccaccctctccaccagcgacacgtgaccatccccaccagcgtcccccagcagcag
gtgttcgccctggccgagccacccaagcgaaagccataccagctactctacagcatcacc
cgcagcacctttttcaggaagtga
DBGET
integrated database retrieval system
