KEGG   Hippocampus comes (tiger tail seahorse): 109531466
Entry
109531466         CDS       T04969                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hcq03009]
    109531466 (rrp9)
Ribosome biogenesis [BR:hcq03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    109531466 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF12 WDR54 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 109531466
NCBI-ProteinID: XP_019751327
LinkDB
Position
Unknown
AA seq 484 aa
MSSSFFIKGSKKPQMAKIGKKTVISKRKGDGDTAGKVKGKKQNSKYNEEISSDSETESPV
VAKKRQAKEEHDYDETPQEKKLRLAKLYLNQLKEQEEEKVEDESFETDLIAGRLQEEVLE
QKGKLQRLIAKDLLPPDASEIRLLRGHKLPITCLVISPDDKCIFSSAKDCSIIKWHIESG
KKLRVIPGGRKGTEDRHVGHTAQVLCMSISSDGKYLATGDMNKLIMIWEAETCNHLYKFT
GHKGAVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITALDSLSRERCV
TAGGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVCLWSVNKKKPL
STVKQAHGCHGDAGLEQPHWVAAVAALQNTDVVASGASGCSSNSQVQVWKCGPNYRGLEP
LFSIPVVGFVNSLKFSHTGHFLVAGVGQEHRLGRWWRQKEARNGICIIPLKRKTPNQDEA
PTAE
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcatcgtctttctttatcaaggggtccaaaaaacctcaaatggcgaaaattgggaaa
aagacagtgatatcgaagcggaaaggtgacggcgacacggccgggaaagttaaaggcaag
aaacagaactcaaagtacaacgaagagatttccagcgactctgagacagagagtccggta
gttgccaagaaaagacaggccaaagaggagcatgactatgatgagactccacaggagaag
aagctcagattagccaaactttatctcaaccagttaaaggaacaagaagaagaaaaggta
gaagatgaatcatttgagactgatttgattgcgggaagacttcaagaagaagtgcttgaa
cagaaaggaaaactacagcgacttattgccaaagatctattaccacccgacgcttctgaa
attcgtctgttacgaggacacaagctcccaatcacttgcttggtcatcagccctgacgat
aagtgcatattctcatctgcaaaagactgctccataattaaatggcatatcgagagtggg
aaaaagttgcgagtcatacctggtggaaggaaggggacggaggatcgccatgttggacac
acggctcaagtactgtgcatgtccatatcatccgacggaaaatatttggccactggagac
atgaacaagctgatcatgatttgggaagctgaaacctgcaaccatctttacaaattcaca
ggacacaaaggcgccgtgtcgggtctttcgttcaggaggggaactcacgatctctatagc
gcctcacacgatcgctccatcaaagtgtggaatgtggatgaaaatgcctacgtggagaca
ctcttcggccatcaggatgccatcacggcactggacagcctgagccgagaacgctgcgtg
acggccggcggtcgcgaccgcaccgtgcgggtgtggaaaatcgcagaggagtcgcaactc
gtcttccacggccacgagggctctatagattgcatccagctcattaacgaggagcacatg
atcacgggagctgacgacggctcagtgtgtctttggagcgtcaataagaagaagcccctc
agcacggtgaagcaggctcacggttgccatggcgacgccgggctggagcagcctcactgg
gtcgccgcggtggccgcgcttcagaacaccgacgtcgtagcctcaggtgcctccggctgt
tccagcaactctcaggtgcaagtgtggaagtgtggtccgaattatcgagggcttgagcct
ctcttcagtattccagtggtcggttttgtcaacagcttgaagttttcacacactggtcac
ttcttggtggcgggtgtcggccaggagcacagattgggtcgatggtggagacaaaaagag
gctcgcaacggcatctgtatcattcccctgaaaaggaaaactcccaatcaagatgaagcc
ccgacagcggaatag

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