Hippocampus comes (tiger tail seahorse): 109531545
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Entry
109531545 CDS
T04969
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109531545 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109531545 (cstf3)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109531545 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
109531545
NCBI-ProteinID:
XP_019751445
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSTDAAADQAAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEVKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYESAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDPRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGNLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVTRAKLAALLPEAVAVPSAPTLKDEIDRKPEYPKPDTNQMIPFQPRHLAAP
GLHPVSGGVFPVPPVAVILMKLLPPPTCFTGPFVQVDELIETFRRCTLPETIEAAVELIT
GRLPDGGGEGNGAVENHATTKSLKRPNADSDEEDDKGAVAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagacgcagcagccgaccaggcggcggcagagtatgtcccggagaaggtgaag
aaggcagagaaaaagttggaagagaacccatatgaccttgacgcttggagcattctgatt
cgagaagcacagaaccaacctattgataaagcaaggaagacatatgagcgacttgtcaca
cagtttccaagttctggcagattctggaaactcttcattgaagctgaggtcaaggcaaaa
aactatgacaaggtagaaaagttgtttcagagatgcctgatgaaagtgttgcacattgac
ctctggaaatgttaccttgcatacgtgcgagagaccaaaggaaagctccccagctacaag
gagaagatggcccaggcatacgactttgccctggataaaattggcatggaaatcatgtca
taccagatttgggtggactacattaacttcctgaagggagttgaggctgtgggttcgtat
gcagagaaccagcgcatcacagcagtgcggagggtctaccagaggggttgtgtgaatccc
atgattaacatcgagcaactctggagagattatagcaaatatgaggagggaatcaatata
cacttggccaagaaaatgattgaggatcgaagccgagactacatgaatgccaggagagta
gcgaaggagtatgagacggtgatgaaaggcttggacaggaatgcgccctccgtgccgccc
cagaactccccgcaggaggctcagcaggtggatatgtggaagaagtacattcagtgggaa
aaaagcaacccgctgcgcacagaagatcagacgctcatcacaaagagagtgatgtttgcc
tatgagcagtgtctgctggtgctggggcaccatcctgatgtgtggtatgagtcagctcag
tacctggagcagtccagcaagttgttggcagagaaaggggacatgaataactccaaacta
ttcagcgacgaggccgcaaacatctatgaacgtgccattgggacactactgaagaagaat
atgcttctttatttctcatttgccgactacgaagaaagccgtatgaagcacgagaaggtg
cacagcatctataataaactgctggccattgaggacatcgaccccacgttggtgtacata
cagtacatgaagttcgccaggagggcggagggcatcaaatcgggccgcaccatcttcaaa
aaggcccgcgaggatccgcgcacacgccatcacgtttacgtcactgcagctctgatggag
tactactgcagcaaggataaatctgttgcctttaagatttttgagcttggattgaagaaa
tatggagacattccagagtacatactcgcatacatcgattacctctctcaccttaatgag
gataacaacaccagggttctatttgaacgggtactcacctcaggaaacctttcaccagag
aagtcaggggagatctgggctcgttttctggcctttgagagcaacatcggcgaccttgcc
agtattctgaaggtggagcggcgccgtttcaccgccttcaaggaggagtacgagggcaaa
gagacagctttgctcgtggacagatacaagttcatggacctgtatccttgctctgccagt
gaactcaaggctctgggatacaaggatgtgactcgtgccaaactggcagctctgcttcct
gaggctgtggcggtgccctctgcgcccacgctgaaggacgaaatagatcgaaaaccagag
taccccaagccggacaccaatcagatgatccccttccagccgcgccacctagcagctcca
ggcctgcaccctgtatccggcggagtgttcccggttcctccggtggctgttattttaatg
aagctgctccccccgccgacgtgtttcaccggtcctttcgttcaagtggatgagctcatt
gagactttcaggagatgcacacttccggaaactatcgaggctgctgtggagctcatcact
ggcagactgccagacgggggcggcgagggcaacggcgctgtggagaaccacgccaccact
aagtcactcaagagacccaacgccgactcggatgaggaagatgacaaaggagcggtggcg
ccgcccgtccatgacatctaccgcgctcgccagcagaagaggattcgatag
DBGET
integrated database retrieval system
