KEGG   Hippocampus comes (tiger tail seahorse): 109531627
Entry
109531627         CDS       T04969                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hcq04131]
    109531627 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hcq04147]
    109531627 (copb2)
Membrane trafficking [BR:hcq04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    109531627 (copb2)
Exosome [BR:hcq04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109531627 (copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 109531627
NCBI-ProteinID: XP_019751577
LinkDB
Position
Unknown
AA seq 933 aa
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATTSGNAPMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFAAEDYLRGNCSGSTRPATDYPLVTLNEDRNILEEA
QGYNPKGIFGVSALETEECEESPLASAPAIAPESLVMPLEPEPVPPQSQKETPNFSQSEK
DKVLEELEIDLDNLEVDDIDTSDVNLDDDFLED
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgccgctgaggcttgatattaagcgcaggttgacagccagatctgaccgtgtgaagagt
gtggaccttcatccaaccgagccatggatgctagccagtctgtacaacggcagcgtctgt
gtgtggaaccacgaaacacagacactggtgaagacgtttgaggtgtgtgacctccccgtc
agagcgtccaaatttgtggccaggaagaactgggtcatcacaggagcagatgacatgcag
atccgtgtgttcaactacaacaccttggagcgtgttcacatgtttgaggcccactctgac
tacatccgttgcatcgctgtgcaccccactcagccctacatcctcaccagcagcgatgat
atgttgatcaagctgtgggactgggacaagaagtggtcctgcagtcaggtgtttgagggt
cacacgcactatgtcatgcagatcgtcatcaaccccaaggacaataatcagtttgccagt
gcctcccttgacaggactatcaaggtctggcagctgggctcctcatctcccaacttcact
ttggaaggccatgagaaaggcgtcaattgcatcgactattacagtggaggagacaagccc
tacctgatttcaggcgctgatgaccgccaggtcaaaatatgggactaccagaacaagacc
tgtgttcaaactctggagggtcatgcccaaaacgtctcatgtgtgagcttccacccggag
ctgccaataataatcactgggtcagaagatggtacggtccgtatctggcactcgagcaca
taccgcctggaaagcaccctcaactatggcatggagagagtgtggtgtgtgtgcggtctc
aggggctccaacaatgtcgcgctgggttatgatgaaggaagtatcattatcaaagtgggg
cgtgaggagccggccatgtcaatggacaccagtggcaaaattatttgggccaagcacagt
gaaatacagcaggccaatttgaaggcaatgggtgacacagagatcaaagatggggagcgg
ctcccgctggccgtgaaagacatgggcagctgtgaaatatatcctcaaactatccagcat
aacccaaatgggaggtttgttgtggtgtgcggtgatggagaatacatcatctatactgcc
atggctctgaggaacaagagcttcggctcagcacaggagttcgcttgggcacatgactca
tctgaatatgccatcagggaaagcaacagcattgtcaaaattttcaaaaacttcaaagag
aagaaatcctttaagcctgactttggagctgagggtatctacggtggtttcttactcggg
gtgaggtcagtgaatggtctggcgttttatgattgggagaacaccgagctgatccgccgc
attgaaatccaaccaaaacatatcttctggtctgactctggcgagctggtctgcatcgct
acagaagagtctttcttcattcttcgttacatggccgataaagtagctgcctcacaagag
aacaacgaaggagtgacagaggatggaattgaggatgcttttgaggtccagggagaaatc
caggagatcgtgaagacgggcctctgggttggtgactgcttcatctacaccagctcggtg
aacagacttaattactttgtaggaggagagatcgtcactattgctcatctggacagaacc
atgtatttactgggctacatccccaaagatgaccgcctgtacctgggagacaaggagctc
aacattgtcagctactccctcctagtctcggttctggagtatcaaactgctgtcatgagg
agggactttgggatggccgacaaggtgcttcccacaattcctaaagagcaacgaaccaga
gtggcccacttcctggaaaaacagggtttcaagcagcaggcgttagctgtgtccacagac
ccggagcataggtttgagctggccttgcagctgggagaattgaagattgcctaccagctg
gctgtagaagcagagtcggagcagaaatggaagcagttggcagagctggctattagtaag
tgtcagtttggcctggcccaggagtgtctgcatcatgcacaggattacgggggcctactc
ctcctcgccaccacctcgggtaatgcgccaatggtgggcaagctggccgagggtgcagaa
agagatggcaagaacaacgtggccttcatgacctacttcctgcaggggaaactggatcag
tgtttggagcttttgatccgaaccaaccgcctacctgaggctgcattcctggctcgcaca
tacctgcccagccaggtgtcccgggtggtcaaactgtggagggaaaatttgtccaaggtt
aaccagaaggctgctgaatccttagcagatcctacagaatatgaaaacctgtttcctggt
ctgaaagaagcatttgcagctgaggattacctcagaggaaattgctcaggttccaccagg
cctgccacagactaccccctggtcactctaaacgaagacaggaatattctagaggaggct
caaggatacaatcccaaagggattttcggagtttctgctctcgagacagaggaatgcgaa
gagtctcctttagcgtcagcccctgcaattgcaccggagtctttagtcatgcctttagag
cctgaacctgttcctcctcagtctcagaaggaaaccccaaacttctcccagtcagaaaaa
gataaggttctggaagagctggaaattgaccttgacaatttggaggtagatgacatcgac
accagtgatgttaacctggatgatgactttcttgaggactag

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