Hippocampus comes (tiger tail seahorse): 109531767
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Entry
109531767 CDS
T04969
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109531767 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109531767 (hbs1l)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109531767 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GTP_EFTU_D4
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
109531767
NCBI-ProteinID:
XP_019751806
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MKELAGQGRVAGHQLRLMCARGRACAWWSPLKGPSFCSIYPGRPICHLLTTENDIRVPGE
LHDQRDFEDDDMYGQSVEDDYCISPATANQFIYSRREKQVPKEEPLEEEEYEEEDVPMSP
TISHNLDPLDQAKLYSCLDHMRAVLGDSMPDSLLNQAAIRCGFDAQKALDAVLSEDPKRA
PVPNRTGADVEKAPLPQRSRQAAMIEKAKSRDVSNNKLDCEVVPKVARMTVSGKKQTMGF
DVPSSGDNGVIAAAGRRVNSPENTTATPAAGEAAPKRPETPSRGSNEDELAGVPAPGRAA
GKARQTMDVKAELEKRQGGKSLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYETE
SKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETESKVVTLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGGFEAGFEAGGQTREHGLLVRSLGVTQLVVAVNKMDQVNWQPERF
QEITSKLGHFLKQAGFKDSDVFYIPTSGLSGENLSTRSLVSELTAWYSGLSLLEQIDAFR
PPQRSVDKPFRMCVSDVFKDQGSGFCITGKIEAGYIQTGEKLLAMPPNETCLVKGITLHD
APLDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFRARLLLFNFEIPITKGF
PVLLHYGTVSEPATITKLLSILHKSSGEVLKKKPKCLGKGMNAIVEIQTQRPVALELYKD
FKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttggcaggccagggtcgtgtggctgggcatcaacttagattaatgtgtgcg
cgtgggcgcgcgtgtgcatggtggtctccattgaaaggcccttccttctgctctatttac
ccagggcggccaatttgccacttgttgacgaccgaaaatgacatcagagtgccgggcgag
ctgcatgaccaaagagattttgaagatgatgacatgtacggacagtctgtggaggatgac
tactgtatatcaccagcaacagcaaatcagttcatctactctcgacgagagaagcaagtg
ccgaaggaggagccccttgaagaggaagaatacgaagaagaggatgtacccatgtccccc
accatcagccacaaccttgacccgctggatcaagccaagctctactcctgcctggaccac
atgagggctgtgctgggcgactcgatgcctgactccctgttgaaccaggcagccataaga
tgtggctttgatgcacagaaggcgctggatgcggtcctgtccgaagaccccaaaagggcc
cccgtccccaaccgaaccggtgctgatgtcgagaaagcaccgttaccgcaaaggagcagg
caggcagccatgattgagaaagctaaaagcagagacgtctcaaataataaactggactgt
gaagtcgtacccaaagtggcccgcatgaccgtctcgggcaagaagcagaccatgggcttt
gacgttcccagcagcggcgacaacggcgtcatcgccgctgcggggcggcgggtcaacagc
cccgaaaacaccacggcaacacccgccgccggcgaggccgcacccaaacgacccgagaca
ccttcccgaggttcgaacgaggacgagctggccggcgttcccgctcccgggcgcgctgcc
ggaaaggcccggcagaccatggatgtgaaggctgaactggagaagagacaagggggcaaa
tctctgctgaatttagtggtgatcggtcatgttgatgcagggaagagcacgctgatgggc
cacctgctctatctgctgggcaacgtcaacaagcgcaccatgcacaagtacgaaaccgag
tccaagaaggcgggcaaggcttcgttcgcctacgcctgggtgctggatgaaactggcgag
gaacgcgacaggggtgtgacgatggatgtcggcatgactaaatttgagaccgagtcaaag
gtggtgacgctgatggacgcgcccgggcacaaagacttcatccccaacatgatcaccgga
gcggcgcaggcggacgtggccgtgctggtggtggacgccagtcgaggggggttcgaggcg
ggctttgaggcgggcggccagaccagggaacacggcctgttggtgcgttcgctgggcgtc
actcagctggtggtggcggtcaacaagatggaccaggttaattggcaaccggagcgcttc
caggaaatcacctccaaactcggccacttcctcaagcaggcaggcttcaaggactctgac
gttttctacatccccaccagcggcctgtctggagagaacctcagcactcggagtttggtg
tctgagctcaccgcttggtattccggtctcagcctgctggagcagattgatgccttcagg
cctcctcagcgctctgtggacaaacctttccgaatgtgcgtgtctgatgtctttaaagac
cagggctcgggcttctgcatcacaggcaagatcgaggccggttatattcagactggagag
aaactgctggccatgccccccaatgagacgtgtctcgtcaaaggaatcactctgcacgac
gcccctttggactgggctgcagccggggatcatgtcagcctgacggtaactggcatggac
atcatcaagatcaatgtgggctgtgtgttctgtgatcccaaagagcccatccgagtctgc
acaagattcagggcgcgactattactctttaattttgagattcccatcacaaaaggcttc
ccggtcttgttgcattacgggaccgtgagcgagccggccaccattaccaaactcttaagt
attttgcacaagagcagcggcgaggtcctcaagaagaaaccaaagtgcttggggaaaggc
atgaacgccatcgtggagatccagacgcagaggccggtggcgttggagctctacaaagac
ttcaaagagctgggtcgcttcatgctgcgctacgtgggctccaccatcgctgcaggcgtg
gtcaccgagatcaaagaatga
DBGET
integrated database retrieval system