Hippocampus comes (tiger tail seahorse): 109531833
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Entry
109531833 CDS
T04969
Name
(RefSeq) transcription factor SOX-5-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109531833
Transcription factors [BR:
hcq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109531833
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
CENP-K
PSD2
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
109531833
NCBI-ProteinID:
XP_019751894
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MQVSPGAKQHGLASQANLGTHSPPTNAHAQSDKGRSSPQLNKTKDSEGAQPLNLSAKPKA
SESKSPNSPPTSPQVHAAAAAAAKLGPAGSMKHSVAPSSIGGPPARVSSIADLLSSLSSG
AYLNDHEAVTKAFAEARQMKEQLKREQQVLDAKVAAVSSLGLNNGRSDKDKAALESLSQQ
LKQQAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFREARGRGSSEPHIKRPMNAFMVWAKD
ERDDPANPEPSSFQGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVD
GKKLRIGEYKAIMRSRRQEMRQYFSVGQQSQLPLSSAGVVYPGALSMAGMPSPQMPSEHS
SMSSSPEPNANHHQHHLHSSSHLGGLKGDEPRVKEEELRLDDSNGDVYDDFDYEDEEADY
ASDSENHIAQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctcccccggggccaagcagcacggcctggcgtcccaagccaacctgggcacg
cactccccgcccaccaacgcacacgcgcagagcgacaagggccgcagctccccgcagcta
aacaagaccaaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggca
tccgagagcaagtcacccaactcccccccaacttccccacaggtccatgctgccgctgcc
gctgccgccaagctgggccccgccggctccatgaagcacagtgtcgccccctccagcatc
ggaggacctccggccagagtcagctcaatagcagacttgctgtcgtcgctgtcttcggga
gcctacctgaatgaccacgaggccgtgaccaaggcctttgccgaggcccgccagatgaag
gagcagctcaagcgggagcagcaggtgctcgacgccaaggtggcggccgtcagcagcctc
ggacttaacaacggacgctccgataaggacaaggcggccttggagagtctgagccaacag
ctgaagcagcaggccgaggacaagttcagccacgccatgctggacttcaccatgagcggc
gactctgacggctccccgagtgtgtccgactctcggatattccgcgaggcccggggtcgc
ggcagcagcgagcctcacatcaagcggcccatgaacgcgttcatggtgtgggcaaaggac
gagcgggatgatccggcaaaccccgaaccgtcctctttccaaggctcgcgctggaaagcc
atgaccaacctggagaagcagccgtactacgaggagcaggcgcgcctcagcaagcagcat
ctggagaaatacccggattacaagtacaagccgcggcccaagcgcacgtgcctggtggac
ggcaagaagctgcgcattggcgagtacaaggccatcatgcgctcccggcgacaggaaatg
aggcagtacttcagtgtggggcagcagagtcaactgcccctgtcgtcggcgggcgtggtc
tacccaggcgccctctccatggcaggcatgccatcgccccagatgccctcggagcactcg
agcatgtcgagcagccccgagcccaacgccaaccaccaccagcaccacctccactcctcg
tcgcacctgggcggcctgaagggcgacgagcctcgcgtcaaggaggaggagctgcggctg
gacgacagcaacggcgacgtctacgacgactttgactacgaggacgaggaggccgactac
gccagcgacagtgagaatcacatcgcccaatag
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