Hippocampus comes (tiger tail seahorse): 109532043
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Entry
109532043 CDS
T04969
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109532043 (supt6h)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109532043 (supt6h)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109532043 (supt6h)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109532043 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
109532043
NCBI-ProteinID:
XP_019752197
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDDDEEEENMEDQDERGNLRGLIDDGEEE
EEEEDVGAQKSASDGGSDSEEEVRHRRKKRNYNDLDEDDLDLIEENLGVKVKRRKKKYDR
VKTLDDDDDDEKDLIADEIFHGDGDGELEEGEAVHEPLQQADDDEEGEEEESDIDDFIVD
DDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFAEFDADAYDQGEEEEEDQDEEGWDR
PKKQTKRRQGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDELE
EEAEWIFRHGFSTLTISIQESADYLERGTSTNFSRQGPSTTAKIKEALNFMRNQQFEVPF
IAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQAYQFEQISADPDKP
LADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKAGKKRLRKIKEV
AEDGEEAEVEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRDS
YQRHETEQFPAEPVELAKDYVCSQFPAPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQER
AKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELSGDQFLKMCLAEDEGLLSIDICIDL
VGVKGYAADQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELKSKL
VAEARESIIRSCCRRLYNWLKVSPYRPDQQLEEDDDLMDESQGKGIRVLGVAYAPSRDTP
VFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKANDIENLKRFLASKKPHVIAVAGE
NRDAQMITEDMKRTIGELEQESSLPSVGVELVDNELATLYMNSKKSEADFRDYPPLLRQA
VSIARKIQDPLVEYAQVCSSDEDIVCLKLHPLQEHVVKEDLLSALYCEFINRVNEVGVDV
NRAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNLL
TKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIE
KFSVDLTCRTSDLSDKANEWKLPKDTYYDFDAESEDVKLEEELKKKRQRTPYIKRVIAHP
NFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFS
LGHTLWINNEEFEDLDEITARFIQPMASFARDLLSHKYFQECHGGSKEKMEELLVRTKRE
KPTFIPYFVSACKTLPGKFLLGYQPRGKPRVEYVTIIPDGFRYRSQVFPTVNGLFRWFKD
HYQEPVPGITPANSSSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFSAIAAVT
GQNQNPNTTPAQWGSSQYGYGGSTGGGGSSSAYHVFATPQQPMATPMMTPNYAFATPGQQ
TMGTPQYPGSTPQSAHHGGHHGHASGTPASSVSSSRGRTPQQQPKASGSGGGGGSAAAVD
WGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSVAGDATPLLDEMDR
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcatcgagagcgaggctgaagagtctgaggaggagtttgaagagaaagac
ctgaagcccaagaagacgcagaggttcatggaggacgacgatgacgaggaagaggagaac
atggaagaccaagacgagcggggcaacttgcgtgggctcatcgacgatggcgaggaggag
gaggaggaggaggatgtgggagctcaaaagagtgcaagtgatggtggcagtgactcagag
gaggaagtccgccatcgccgcaaaaagcggaattacaacgacctggacgaggatgacctg
gacctcattgaggaaaacttgggtgtcaaagtcaagaggaggaagaagaaatacgaccgt
gtgaaaacactggatgacgacgacgacgacgagaaagacctgatcgcagacgaaatcttt
cacggcgacggagacggcgagctggaggagggcgaggccgtccacgagcctctccagcag
gcggacgacgatgaggaaggagaggaggaggagtcggatatcgatgactttatcgtggat
gatgatgggcagcccatcaccaaaaaacggggcaagaaattctccggctacaccgacgca
gccctgcaggaggcgcaggagatcttcggcggcgactttgacttcgcggagttcgacgcc
gacgcgtacgaccagggcgaggaggaggaggaggaccaggacgaggagggctgggaccga
cccaagaagcagaccaagcggcggcagggtcgcaagagcatctttgagctctacgagccc
agcgagctggagagcagtcacatgaccgaccaggacaacgagatccgctccaccgacatg
cccgagaggttccagctgcgatccatccccgtcaaaccggccgaggacgacgagctggag
gaggaagcggagtggatcttccggcacggcttctccacgctcaccatttccattcaggag
agcgccgactatttggagcgcgggacttccaccaacttcagccgccagggtcccagcacc
accgccaaaatcaaagaggcgctcaacttcatgaggaaccagcaatttgaggttcccttt
atcgcgttctacagaaaagaatacgtggagccagagctgaatatcaatgacctgtggaag
gtgtggcagtgggatgaaaagtggactcaactgaaaacccgcaagcagaatctgacgaga
ctctttcagaagatgcaagcttaccagtttgagcaaatctccgccgaccccgacaaacct
ttggccgatgggattcgcccactggacacggctgacatggagaggctgaaagacgttcag
accctggaagagctgggcgacgtctacaaccacttcttgctctactacggccgagacatt
cccaagatgcagaatgccgccaaggccggcaagaagaggctgcgcaagatcaaggaagtc
gccgaagacggcgaggaggcggaagtggaggtcgaagaagaggaggagcagaagggtccg
gacctcaagctggcatcccgcagggacatgtacagcatctgccagagcgtgggcctcgac
ggcctggccaaaaagtttggcctgacgcccgagcagttcggcgagaatctgcgagacagc
taccagcggcacgagacggagcagttccccgccgagcccgtggaactggccaaagactac
gtgtgcagccagttccccgctccggaggccgtcctggagggcacgcgctacatggtggcc
atgcagatcgcccgcgagcctttggtccgacacgtgctgcgccagaccttccaggagagg
gccaagatcaacatcaagcccaccaagaagggcaaaaaggaagtggacgaggcccacttt
gcctactccttcaagtacctgaagaacaaggcggtgaaggagctgagcggcgatcagttc
ctgaagatgtgcttggccgaggacgagggcctgctgtccattgacatctgcatcgacctc
gttggggtgaaagggtacgccgctgaccagacctactttgacgaaatcaagcagttctac
taccgcgacgagtttagccatcaggtgcaggagtggaaccggcagcgcaccttggccatc
gagagggccctcaaccagttcctctaccctcagatggccaaagagctcaagagcaagctc
gtcgccgaagccagagagagcatcattcggtcgtgctgccgccgactgtacaactggttg
aaggtgtctccttacaggccggaccagcagctggaggaagacgacgacctgatggacgag
agtcagggcaaaggcatcagggtgctcggagtggcctacgcgcccagcagagacacgccc
gtcttttgcgcgttgatcaatggcgaaggtgaggtggtggacttcctgcgcctgccctac
ttcatgaagaggaggaacgctttcagggaggacgagcgagagaaaaaggcgaacgacatt
gaaaacctcaagaggttcttggccagcaagaagccccacgtgatcgccgttgccggggaa
aaccgggacgctcagatgatcacggaggacatgaagaggaccatcggcgagctggagcag
gagtcgtcgctgccctccgtcggcgtggagctggtggacaacgagctggccacgctctac
atgaacagcaagaagtcggaggccgactttcgggattacccccccttgctgcgccaggcc
gtgtccattgccaggaagatccaagatcctcttgtggagtacgcgcaggtctgcagctcg
gacgaagacatcgtctgcctcaagttgcaccccttgcaggaacacgtggtgaaggaggac
ctgctctcggcgctctactgcgagttcatcaatcgggtcaacgaggtcggcgtggatgtg
aaccgggccatcgctcaccctcacactcagagtctggtccagtacgtgtgcggtctgggc
ccaaggaagggctcgcacctgctcaagatcctgaagcagaacaacacgcgtctggagaat
cgaacgcagttggtcaccatgtgtcacatgggcccaaaggtcttcatcaattgcgccggt
ttcatcaagatcgacacggcgtcgctcggagacagcaccgactcctacatcgaggttctg
gacggctcccgcgtccacccggagacgtacgagtgggctcgcaagatggccgtggacgcc
ctggagtacgacgaatcggccgaggacgccaacccggccggcgccctggaagagatcttg
gagaaccccgaacggctcaaagatctcgacttggacgccttcgccgaggagctggagaga
cagggctacggcaacaagggcatcacgctgtatgacatcagagccgagttgagctgcaga
tacaaagacctgcgggtcccgtacagagtccccaacacggaggaggtcttcaacctgctc
accaaggagacgccggagaccttctacatcggtaagctgatcaccagcgtggtgaccggc
atcgctcaccggcgcccccagggggagagctacgaccaggccatccgtaacgacgccacg
ggcctgtggcagtgtcccttctgccagcaggacaatttccccgagctcagcgaggtgtgg
aaccactttgacagcggctcctgccccggccaggccatcggggtgcgcagcaggctggac
aacggcgtgcagggcttcattcccaccaagttcctgagcgacaaagtggtgaagcacccc
gaggagagggtgaaggtgggcatgacggttcactgccgcatcatgaagatcgacatcgag
aagttcagcgtggacctgacgtgtcgcacctccgacctgtcggacaaggccaacgagtgg
aagcttcccaaggacacctactacgactttgacgccgagtccgaagacgtcaagctggag
gaggagctgaagaagaagcggcagcgcacgccgtacatcaagcgcgtcatcgctcacccc
aacttccacaacatcagcttcaaccaggccgagaagatgatggagacgctggaccagggg
gacctgatcatcaggcccagcagcaagggggagaaccacctcaccgtcacctggaaggtg
gccgacggcatctaccagcacgtggacgtgagagaggaaggcaaggagaacgccttcagc
ttgggacacacgctctggatcaacaacgaggagtttgaagacctggacgaaatcacggca
cgcttcattcaacccatggcgtcgttcgctcgcgacctgctgagccacaaatacttccaa
gagtgtcacggcgggagcaaggagaaaatggaggagctgctggtcaggaccaagagggag
aagcccaccttcattccctactttgtgtcggcgtgtaaaactttgcccgggaagttcctg
ctggggtaccaacctcgaggaaaaccgcgggtggaatacgtgaccatcatcccggacggc
ttcaggtaccgctcgcaggtcttccccacggtcaacggcttgttccgctggttcaaggac
cactaccaggagcccgtgccaggcatcacgcccgccaacagcagcagcagccgcacgcgc
acgcccgcctccgtcaacgccacgcccgccaacatcaacatcgccgacctgacgcgagcc
gtcaacgcgctcccgcgaaacatgacctcgcagatgttcagcgccatcgccgccgtcacg
ggccagaaccagaaccccaacaccacgcccgcccagtggggatccagccagtacggctac
gggggcagcaccgggggaggaggcagctcctcggcctatcacgtgttcgccacgccccag
cagcccatggccacgcccatgatgacgcccaactacgcgttcgccacgcccggccagcaa
acgatgggcacgccgcagtacccgggctccaccccgcagtccgcccaccacggcggtcac
cacggccacgcgtcgggcacgccggcctcgtccgtgtcgtcgtcgcggggccggacgcct
cagcagcagccaaaagcgagcggcagcgggggcggcggcgggtccgcggcggcggtggac
tggggcaagatggccgagcagtggctgaaagagaaggaggccgaaggtcgcaagaaggct
cagaggatgaccccgcgcccttcgcccagccccatgatcgagagcacgcccatgtccgtc
gccggagatgccacgcccctgctggatgagatggaccggtag
DBGET
integrated database retrieval system
