Hippocampus comes (tiger tail seahorse): 109532316 Help Entry 109532316         CDS       T04969                                  Name (RefSeq) rootletin-like isoform X1   KO K16469   rootletin Organism hcq  Hippocampus comes (tiger tail seahorse) Brite KEGG Orthology (KO) [BR:hcq00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:hcq03037]     109532316 Cilium and associated proteins [BR:hcq03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    109532316 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rootletin Tup_N Motif Other DBs NCBI-GeneID:  109532316 NCBI-ProteinID:  XP_019752700 LinkDB All DBs Position Unknown AA seq 1888 aa AA seqDB search MSSSLEEDGTHSPTLDLVIQKLEESLLDFESHEPNSGVAPAPVSTCIHRIITRNLAELPD DKAAMEENLQDADSLTVMVCKEQVKQCSLTKKLDHMLSMPSPADSDQESLLPRQQAVQDR GYRQRLLLFQEAQQKQVQLVQRLQTKVLQYKGRCGQLEGQVLEKTSDVEKMRLLLQSHQD SAQRQVQDLNISIRSKIAQLEEEQRRCGSLGQVNCVLREQLERADALNQGLVESLRKARQ DAELCDTRLRHVHETSSCRLSREQAHVRSLWRQAASLRTAFTQLRTFADRTLSDMRSEYV AAGQRLQVACRHLETQAAQESASGGVDVSALERQLKDELQEAMQLQGCWDAEKVELNSRL MELMDTVKHLRSQNSEKDASLDRMETSRSEDKGEMEVLKAENQTLHKVLCKVHQMVSNEG DGGTFGGLLDCSPQSIATLMAVQGALDKHKQQIQDLCSHLEASLKEANLLRSRLQQGDSD KTELEARIRQVTKESQEVQKALEETVRERDRYRSSLDVMSSEKCGVEQLLARVQQECDSQ RSELEALRRQHLDADLQLARLRSEVQQGEQSLEELEGKHSDLRRELVAAREALSRSGLEK EVLEEDKASLALALTKAECRSATQEALVAKLHHQEAGLKDSLAKMVALSEGLAKDKVELN RLLLQAETEKAELGDRRREAEVERAAAREEVAQLQREKTNALAEKESLKRSQGILWDLRR KMEDDLDRLQKENAHNLEQHSQVSRQVQSTSEELCESRRQLDEQAAALERVATDRGDLAK DKAALEVRLCSAERKTCDLAQELLALRAENQSLETSLFQSQELASSLEAECRRVEAERRS VMLANEALTRDVARVRLDAERELAQVAQERSDLEEKLLQAERKALQSLKNSDELHREQLE DERRRKEQQLLEMTRQQEQLRSLNQELAERSREEVQKAKEEMLRAQQDCERSIMKAHSEK QQTLSQKEMENVSLLEKLAALQKDLNSVTSDLELTRKEALVAQEQDKNEMSALRRETQQL RADFEASLNSHEAAQQSGRERLRELDKQQQAAQRQVEVLQAQLQDAKEQLGEAWRELADA RRSLQESSQSWEKQRKEAVNLQRLLEDETSAKEAIHASNQELRASVKRAESDNSSLRRAA EEREQQLSILEERSASMQREASTLRSSMREIEKSRLQARRRNQEMRRQVKVLEGEKQNQE QELKQLQVQLCQEEQRHEDARRQAFSLKQRVLECEAARDAASKQVSSLQRRVLELEEAER QGWELLQTRQAQQQLADQKHCDEATRLQRTLEDAALQTGEVNARLGRAEAAALDLEQRLG ESEGRRRQLERKVLAVGSTLRRLRLSSPRRRLPLQGSAGDGISTSCADEELDLDFIQAGL QELQRELRDTRRERDQSEAQRVILSEQVSALKDKSASEVTKLHKSLKQLKDGNREMEERL RESQTSLFMHREAAERDKMGLEEEATQLRSALLASQAESNSLKETMDCSQAQAHAEHERL KEALEEAQSRIVLLELDRCSLEAELQRARQSASELESETTALRGRLAEVSRKLRGSEAAL RAGKERQSAALARAERRQGQLGEQVRALTATLGEQRSSEGALQENLKQLQRTMTDSETER RLLQDLLDESRDALGESKKLNRSLTERSRTLQRQQEDSERKNCELDKHNKSLQQMVKRLL GQSSSASSAVIAGVADSQCINSLETSQAKCHKAPDEISMAICAVHQQNCQNWQHTVLQAA QESVERPESKLSNLQSKVKNLQVAQKADTEKAMMQLGKDKSALKKVLEKAQTDRRRIEEA VASETQKSRVCLEQRLVERQDQVTALQVSTLKQQLDEETRRRQACVHKMLQPSAHSSMLR PPHVDNNKDAFVYNIGLTGRDELFDSSG NT seq 5667 nt NT seq  +upstreamnt  +downstreamnt atgagttcctcgctggaggaagacggcacacattcacctacactggaccttgtcattcag aaattagaggagtctttgcttgactttgagagccatgaaccgaactccggagttgcaccg gcaccggtgtcaacctgcatccaccgtattatcaccaggaacctggccgagttgcctgac gataaggcagccatggaggagaacctacaggatgcggattctttgactgtgatggtctgt aaggagcaagtcaaacagtgcagcctcacgaagaagctggatcatatgctgagcatgccg tcaccggcagactcggaccaagagagtttgttgccgcggcaacaggcggtgcaggatcga gggtacaggcagaggcttcttctcttccaggaggcccagcagaagcaggtccagctggtc caaaggctccagaccaaggtcctacagtacaagggcaggtgtggccagctggaaggacaa gtcctggagaagacctccgacgtggagaagatgcgactgttgctgcagtcccaccaggac tcagcccaacgtcaggtgcaagatctcaacatcagcatccggagcaagatcgctcaactg gaggaggaacagagaagatgtggcagcctgggccaagtcaactgtgttctgcgagaacag ctggagagggcagacgccctcaaccagggcctggtagaaagcctgcggaaggcccgtcag gacgccgagctgtgcgatacgcgcctgcgccacgttcacgagacgtcgtcttgccgcctg agtcgggagcaggcacacgtcagaagcttgtggcgccaggccgcctccctgaggaccgcc ttcactcagctcaggaccttcgctgacaggacactgtctgatatgcgcagcgagtacgtc gccgccggccagcggcttcaagtggcctgtcgtcatctggagacccaggccgcgcaggag agcgcctccggtggtgtggatgtgtcagcgctggagcggcagctgaaggatgaactccaa gaagccatgcagcttcagggctgctgggacgccgagaaagtggaactcaactccaggctc atggagctgatggatacagtcaagcaccttcgcagccaaaacagcgagaaggacgccagc ctggacaggatggagacgagcagaagcgaggacaaaggagagatggaagtcctcaaggct gagaaccaaaccctgcacaaagtactctgcaaggtccaccagatggtgtccaatgaaggt gacggcggcacgtttggaggtcttcttgattgttctccacaaagcatcgccacactgatg gctgtgcagggtgccctcgacaagcacaagcaacaaattcaggatctttgtagtcatctg gaggcctcactgaaagaagccaacttgctgcgtagtcgactgcagcagggtgactcggac aagacagaactggaggcgaggatccggcaagtgacgaaggaaagccaagaggtccaaaag gcattagaggaaaccgttcgggagagggacagataccgctcctcgctggatgtcatgtcc agcgagaagtgtggtgtggagcagcttttagcaagagtgcaacaggagtgcgactcccag cgcagcgagctggaggccctgagacggcagcacctagatgccgacctgcagttggcacgg ctgcgctccgaggtccagcaaggtgagcaaagcctggaggagctggaggggaagcactcg gacctccggcgggagctggtggctgcgagggaggcgctgagccggtcgggcttggagaag gaggttctagaggaggacaaggctagcctggctctggctctcaccaaggccgagtgtcgc agcgcgacgcaggaagcgctagtggccaagctgcaccaccaggaagcgggattgaaagac tccctggccaagatggtggccctgagtgagggcctggccaaggacaaggtggagcttaac cgcctgctactgcaggccgaaactgagaaggcggagcttggtgaccgccgtcgggaggcg gaagtggagcgggcggcggcccgggaagaggtggcccagctacaacgggagaagacaaat gctctggcggaaaaagaatccctaaagcgctcacagggcattttgtgggacttgcgacgc aaaatggaagacgacctggaccgactgcagaaggagaatgcacacaacctggagcagcac tcgcaggtgagcaggcaggtgcagagcacatccgaggagctttgcgagagcaggaggcag ttggacgagcaggcggcggccctggagagagtcgccactgacagaggcgatctagccaag gacaaggcggccctggaagtccgactctgctcggccgagcgcaaaacctgcgaccttgcg caggagctgctggcactcagagccgagaatcagtccctggagaccagcttgttccagagc caggagctggcctcgtccctggaggccgagtgccgtcgcgtggaggccgagcggcgcagc gtgatgttggcgaacgaagccttgacgcgtgatgtcgctcgagtgcgtttggatgctgaa cgtgagcttgctcaggttgcgcaggagcgcagcgacctggaggagaaactgctccaagca gagaggaaggccctgcagagcctgaagaacagcgacgagcttcacagagagcagctggag gacgaacgcaggcggaaggagcagcagcttctggagatgacgaggcagcaggagcagctg cgctcactcaaccaggaattggcagagcgcagcagggaggaggtgcagaaggcaaaggag gagatgctcagagcccagcaggactgcgagaggagcatcatgaaagcccacagtgagaaa cagcagactttgtcccagaaggagatggagaacgtgtcccttttggagaagcttgctgcc ctccaaaaggatctaaactctgtcaccagcgatctggagctcactcggaaggaagcgctc gtcgcacaagagcaggacaagaatgaaatgtcggccctgcggcgtgagacgcagcagctg agagcagactttgaggcgtcgcttaactcgcacgaggcggcccagcagagtggacgcgag aggctgcgtgagctggacaaacagcagcaggcagcccagcgccaggtggaggttcttcag gctcagctgcaggacgccaaggagcaactgggagaagcctggagggagctggccgatgcc cggcggtccctccaggagagctctcagagttgggagaagcagcgcaaggaggccgtcaac ctgcaacgcttactggaggatgagaccagtgcaaaggaagccatccacgcctccaaccag gagctcagagcctccgtcaagcgagcagagagcgacaacagcagtttgaggcgagcggca gaagagcgtgagcagcagttgtccatcttggaagagcgcagcgcctccatgcagcgggag gcgtccaccttgaggagcagcatgcgcgagatcgagaagtcacggctgcaggcacgccga cggaaccaggagatgcgcagacaggtgaaggtcctggaaggtgaaaagcagaatcaggag caagagctgaagcagctgcaggtgcaactctgtcaggaggagcaacggcacgaagacgcg cgacgccaagccttcagcctcaagcagagagtgttggaatgtgaggcagccagagatgca gccagcaagcaggtgtcatccctgcagagacgcgtcttggagctggaggaggctgagcgt cagggctgggagctcctgcagacccgacaagcccagcagcagctggccgaccagaagcat tgtgacgaggccacccggctgcagcgaaccctggaggacgccgccctccagaccggcgag gtgaacgcccggctgggccgcgcagaggccgccgccctggacttggagcaacgactggga gagagcgagggccggaggcgccagctggagcgcaaagtgttggcggtgggctccacgctg cgccgtctccgcttgtcgtctcccaggaggagacttcctcttcaaggctcggcgggagac ggcatctccacgtcctgtgctgatgaagaactggacttggacttcatccaggccggcctg caggaactccagagagaactcagggacacacggagagaaagagatcagtccgaggcccag cgagtcattcttagcgagcaggtgtcagcactcaaggacaagtcggccagcgaggtgacc aaacttcacaagtccctgaagcagttgaaagacggaaacagggagatggaagagcgactg cgcgaatcccagacctcactttttatgcaccgggaagcagccgagcgcgacaagatgggc ctggaggaggaggcgactcagctgcggtccgccctgctcgcttcgcaggctgagtcgaat tcactcaaggaaacgatggattgctcccaagctcaagcacacgcggaacatgagagacta aaagaagccctggaggaagcccaaagtcgtatagtcctcctggagctcgatcggtgctct ttggaggctgaactgcagcgcgcccgccaaagtgcatctgagctggagtcggagacaacg gcgttacgggggaggctggccgaggtctcgaggaaactcagagggagcgaggcggcgctg agggccggcaaggagcgccagagcgcggcgctggcccgggccgagcggcgccagggacag ctgggtgagcaggtgcgagccttgaccgccacgctgggtgagcagcgcagcagcgagggg gcgctgcaggagaacctgaagcagctgcagagaaccatgactgacagcgagacggaacga cgactcctgcaggatcttctggacgaaagccgagatgccctgggggagagcaagaagctg aaccgctctctgacggaacgcagtcggacacttcagaggcaacaggaggactcagagcgg aaaaactgcgagctagacaaacacaacaagagcctgcagcagatggtgaaacgcctcctt ggccagagctcatcagcttcatctgcagttattgctggtgtagctgacagtcaatgcatc aattctcttgaaacatcccaagctaagtgtcacaaagcaccagatgaaatcagcatggcg atctgtgctgtacaccaacaaaattgtcagaattggcaacatacggtactacaggcggcg caggaaagcgttgagcggccggagagcaagttgtcgaatctgcaaagcaaggtgaagaac ctccaggtggcgcaaaaggccgacacggaaaaagctatgatgcagctgggaaaagacaaa agtgctctcaagaaggtattggagaaggcgcagacggacaggcggaggatagaggaggcg gtcgcctcggagacgcaaaaatcgcgagtctgccttgagcagcggctggtggagaggcag gaccaggtgacagccttgcaggtgtccacgctaaagcagcagctggacgaggagacgcgc aggcgacaggcctgcgtccacaagatgctgcagcccagcgcgcactcaagtatgttgcga ccgccacatgtggacaacaacaaagatgcttttgtttacaacattggactgactggacgg gacgaactgttcgattcttctggatga

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