Hippocampus comes (tiger tail seahorse): 109532594
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Entry
109532594 CDS
T04969
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109532594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109532594
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109532594
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109532594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
109532594
NCBI-ProteinID:
XP_019753059
LinkDB
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Position
Unknown
AA seq
625 aa
AA seq
DB search
MKKLTSHHLFRLKSWLKSCLPLVPGTLLPRLAQIAGDTAAMFGANRKKFMEAGLEGDYAA
AADESGGLYYSQPSVFPPHRADKDIMTSSSASSPGQLSQLGASLYGPQSALGFPTRGINS
SAAPVPQSRSALSQSAAAQLSGLAGGAPAMHTPPSPSRGILPLNSRGVLNHNQQVGGPAG
QPVGIGGERGGGAGGRSPGGSSPSIIGMPKQSRQAFTINSMSGFGVSRNPGFNIFNGTDG
SENVTGLDLSDFPALADRSRRDGGANPAPLLNPLAGRAPYVGMVTKPSGEQPQDFSIHNE
DFPALPGPNYQTKDPSGTGDDGKTVTRMHTRARCVRRRATSWQLTLISATQNLSSSGKPA
SNSDGPKFPGDKSCVSASSNNQHKKGIQVLPDGRVTNIPMGMVTDQFGMIGLLTFIRAAE
TDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIR
DKLAAIKLSRYASTGTGVTTRRSACGSRGRPAWSRRSRQTPTRGERTTSLTASTGGRLPR
SSTWNTINWKSDLTFPPLSTTTPPSRPSDWPPAPPRPAVPASARLANGTPAFELAFSYLI
PPAALALPRRGICLSGTANGLCSTL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctcacatcgcatcatctttttcgcctcaagtcgtggttgaagtcgtgtctc
cccctcgttcccggaacgcttttgcctcgcctcgctcaaatagcaggtgacacggcggcc
atgtttggggctaaccggaagaagttcatggaggcggggctggagggcgactacgcggcg
gcggccgacgagtcgggcggcctctactacagccagccgtccgtcttcccgccgcaccgt
gccgacaaagacatcatgacctcatcctccgcctcgtccccgggacagctgtcgcagctg
ggagccagtctctacggacctcagagtgcgctcggcttccccacgcggggcatcaacagc
agcgcggcgccagtgccgcagagtcgaagcgcgctcagtcagtcggccgccgcacagctg
agcggtctcgccggcggcgcccccgccatgcacacgccaccctcgccgagcagggggatc
ctgcccttgaacagccgcggcgtcctcaaccacaaccagcaggtgggcggccccgcgggc
cagcccgtcgggattggaggagaacgagggggcggggccggggggaggagtcccggcggg
tcctcgcccagcatcatcggaatgcccaaacagtcgcggcaagccttcaccatcaacagc
atgtcaggtttcggcgtaagcaggaatcccggattcaacatcttcaacggcacagacggc
agcgagaacgtgacgggcctggacctgtccgatttcccggccctggccgaccgcagccgc
agggacggaggcgccaacccggcgccgctgctcaacccgctggccgggcgggcgccctac
gtgggcatggtcaccaagccgtccggtgagcagccgcaagacttctccatccacaacgag
gatttcccagcactgccgggcccaaattaccagaccaaagaccccagcggcaccggcgac
gacggcaaaacggtgacgcgcatgcacacgcgcgcgcgatgcgtccggcgacgcgcgact
tcctggcagctgactctcatctccgccacgcagaacctcagctcttcaggtaagcccgcc
tccaactcagatggtccaaagtttccgggtgacaaaagttgtgtgtcggcgagcagcaac
aaccagcacaagaaaggaatccaggtgctccctgacgggcgcgtgaccaacatcccgatg
ggaatggtaacggaccagttcggcatgatcggcctgctgacgttcatccgggcggccgag
acggaccccggcatggtgcacctggctctgggctccgacctcaccacgctgggcctcaac
ctcaactctcccgagaacctctaccccaagtttgcgtctccgtgggcgtcggcgccgtgt
cggccgcaggacatcgactttcacgtaccgtcggaatacttgaccaacatccacatccgg
gacaagctggccgccatcaagctgtctcgctacgcttcaacagggactggcgttaccaca
aggaggagcgcgtgtggatcacgcgggcgcccggcatggagccgtcgctcaagacaaacg
cctacgagaggggaacgtactacttctttgactgcctcaactggaggaaggttgccaagg
agttccacctggaatacgataaactggaagagcgacctcacgttccctccactttcaact
acaaccccgcccagcaggccttctgattggccgcccgccccgccccggcccgccgttcct
gccagtgcccgtctggcaaacgggacgcctgcgtttgaacttgcattttcttacctgatc
ccaccggcggctcttgctctcccccgacggggcatctgcctctcaggaacagcgaatgga
ctttgtagcaccctttga
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