Candidatus Hepatoplasma crinochetorum: X271_00095
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Entry
X271_00095 CDS
T03053
Symbol
hup
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hcr
Candidatus Hepatoplasma crinochetorum
Brite
KEGG Orthology (KO) [BR:
hcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcr03032
]
X271_00095 (hup)
03036 Chromosome and associated proteins [BR:
hcr03036
]
X271_00095 (hup)
03400 DNA repair and recombination proteins [BR:
hcr03400
]
X271_00095 (hup)
DNA replication proteins [BR:
hcr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
X271_00095 (hup)
Chromosome and associated proteins [BR:
hcr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
X271_00095 (hup)
DNA repair and recombination proteins [BR:
hcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
X271_00095 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
RHD3_GTPase
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AHK22208
UniProt:
W8GF26
LinkDB
All DBs
Position
99074..99352
Genome browser
AA seq
92 aa
AA seq
DB search
MNNKKNLFEEISKNTGLAKKDVEEIFNLIFINVEKKLKSSEEFSIPQFGKFKIIQRKARQ
GRNPRTGEMIKIASQKVIVFRPSKTLKDKFNN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaaaaaatttatttgaagaaatatctaaaaataccggtttagcaaaaaaa
gatgttgaagaaatttttaatttaatttttatcaatgttgaaaaaaaattaaaatcaagt
gaagaattttcaattcctcagtttggtaaatttaaaataattcaacgtaaagctagacaa
ggaagaaatccaagaacaggtgaaatgattaaaatagcttcacaaaaagttattgttttt
agaccttcaaaaactttaaaagataaatttaataattaa
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