Candidatus Hepatoplasma crinochetorum: X271_00206
Help
Entry
X271_00206 CDS
T03053
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
hcr
Candidatus Hepatoplasma crinochetorum
Brite
KEGG Orthology (KO) [BR:
hcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcr03019
]
X271_00206 (cshB)
03009 Ribosome biogenesis [BR:
hcr03009
]
X271_00206 (cshB)
Enzymes [BR:
hcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
X271_00206 (cshB)
Messenger RNA biogenesis [BR:
hcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
X271_00206 (cshB)
Ribosome biogenesis [BR:
hcr03009
]
Prokaryotic type
rRNA helicases
X271_00206 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SWI2_SNF2
PhoH
Motif
Other DBs
NCBI-ProteinID:
AHK22315
UniProt:
W8GS96
LinkDB
All DBs
Position
complement(209626..210729)
Genome browser
AA seq
367 aa
AA seq
DB search
MKIKINLNKYLESEKFNNLLEVQKDVFSILEVKNNLFCQSPTGTGKTLAYLLPILNQIEM
DKKGVEAIILVPTNELIHQLKNQLLKINKYLNFSYFAITKNLDYDIEKNKYNKEAKIIIS
TIDKISSLQKKSPISYKKLKYIVVDEVDMIDNFKQLEQIKKFVDILKIKNNVSFSFFSAT
LEKNLQNKIEKLFKIKAKVINLNSKLEKKININLIKILNNDRLETLINLLKSNQFNPFFV
IIFANKSKEVKKIYDYLISNNFKDIRYFSADLNIRKRKQIFTEVRNQKIIYLVTTDLYAR
GLDFNNVSHIINYDLPVDLNYFKHRIGRTNRSEDLKGKIYLLYNQNDQEKIKIIKNKNKN
LTFKNLI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaaaataaatctaaacaaatatttagaatcagaaaaatttaataatttattg
gaagtacaaaaagatgtattttcaattcttgaagttaaaaataatcttttttgtcaatct
cctactgggacaggaaaaacgcttgcttatcttttaccaattctaaatcaaatagaaatg
gataaaaagggagtagaggcaattattcttgttccaactaatgaattaattcatcaattg
aaaaatcaattattaaaaattaataaatatcttaatttttcttattttgcaattacaaaa
aatcttgattatgatatagaaaaaaataaatataataaagaagcaaaaataataatttca
acaattgataaaatttctagtttacaaaaaaaatcaccaattagctataaaaaactaaaa
tatattgttgttgatgaagtagatatgattgataattttaaacaattagaacaaattaaa
aaatttgttgatattttaaaaattaaaaataatgtttctttttcttttttctctgcaaca
ttagaaaaaaatttgcagaataaaattgaaaaactttttaaaattaaagcaaaagtaatt
aatttaaatagtaaattagaaaaaaagattaatattaatttaataaaaatcttaaataat
gatcgactagaaactttaattaatttattaaaaagcaatcaatttaatcctttttttgta
attatctttgcaaataaaagcaaagaagtaaaaaagatttatgattatttaatttcaaat
aattttaaagatataagatatttttctgctgatctaaacattagaaaaagaaagcaaatt
tttacagaagtaagaaatcagaaaataatttacttagtaacaactgatttgtatgcaaga
ggattagattttaataatgttagtcacattataaattatgatcttccagttgatttaaat
tattttaaacatagaatcggaagaactaatcgatccgaagatttaaaaggaaaaatttat
cttttatataatcaaaatgatcaagaaaaaataaaaataattaaaaataaaaataaaaat
ttaacatttaaaaatttaatctaa
DBGET
integrated database retrieval system