Candidatus Hepatoplasma crinochetorum: X271_00517
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Entry
X271_00517 CDS
T03053
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hcr
Candidatus Hepatoplasma crinochetorum
Pathway
hcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X271_00517 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcr03400
]
X271_00517 (uvrA)
DNA repair and recombination proteins [BR:
hcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X271_00517 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X271_00517 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND3
RsgA_GTPase
AAA_16
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_18
BCA_ABC_TP_C
AAA_22
AAA_14
ATPase
SLFN-g3_helicase
AAA_21
Viral_helicase1
APS_kinase
NB-ARC
ATPase_2
Stn1_C
NACHT
cobW
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHK22617
UniProt:
W8GK43
LinkDB
All DBs
Position
complement(546673..549492)
Genome browser
AA seq
939 aa
AA seq
DB search
MINDKIIIKNAQENNLKNVDLELPKNKLIVITGVSGSGKSSIAFDVLYNEGRRRYVDSLS
NYARQFLGGTAKPAVDSIEGLSPAIAIDQKTTSNNPRSTVGTITEIYDFYRLLFARIGIP
YCPIHNIEISSQTITQIINQIYNWKENSKLQIFAPLVSNKKGSFKNEISELKKEGFLRIR
VNNEILHLDNIEELDKHKKYTIDILVDRIILNTENRSRIYESLGLATKYADGLVSVENLT
EKKEELYSLKLGCKHGDFSMPKIEPKLFSFNSPLGACNKCNGLGFIQQVTWEKMVDQDKT
ILEGGIKYFGDKLSGYNWEKFIVLLKEYNISLDKKLKDFTEKEQEIILYGSKEPINFKVK
TKSLTVRKYDYIEGLATMIERLNLETASDFARNYYKQFFATSTCDKCNGSRLNQHALAVK
INHKNIFEVTALSIEEANKWIKDLKLSEQELKIVNLVISEIKSRFKFLINVGLGYLTLNR
MANTLSGGESQRIRLASQLGSKLTGVIYVLDEPSIGLHQRDNEKLINTLKEIRDLGNTVV
VVEHDEEMMLESDYLIDIGPDAGIYGGKVIATGTAEEVAKKETHTGNFLSGKDQIEIPKK
RRNISEQKYLEIYGAKANNLKNINVKIPLKKFVVVSGVSGSGKSTLVNEIIYKKLHNLTS
HGNHFDIPGLCDAIKGVENIDKVVRISQDPIGKTPRSNPVTYTSVFSDIRELFASTNEAK
IKGYAAGRFSFNVKGGRCEKCQGDGILRIPMHFLPDVYVKCDECNGKRYNEETLQITFKD
KNIADVLDMSVEEANIFFKNQPKISRKLKYLKDVGLDYIKLGHSSTLLSGGEAQRVKLAT
YLQKKATGKTLYILDEPTTGLHHHDIKKLLVVLNKIVDNGDSILIIEHNLDVIKVADHII
DMGPEGGNHGGKVIAHGTPEEISNSKISETGKYLRYILK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgataaaataataataaaaaatgcacaagaaaataatttaaaaaatgttgat
ttagaattaccaaagaataaactaattgtaattactggtgtttccggatcagggaaatct
tctattgcttttgatgttttatataatgaaggaagaagaagatatgttgattctctttca
aattatgcaagacaattcttaggaggaacagcaaaacctgctgttgattcaattgaaggg
ttatcacctgcaattgcaatagatcaaaaaacaacttctaataatccaagatctactgta
ggaacaattactgaaatttatgatttttatcgattattatttgcaagaattggaattccc
tattgtcctattcacaatatagaaatatcatcacagacaattacgcaaattattaatcaa
atctataattgaaaagaaaattctaaattgcaaatatttgctcctttagtttctaataaa
aaagggtcatttaaaaatgaaatttcagaacttaaaaaagaaggttttttaagaataaga
gtaaataatgaaattttacatttagataatatcgaagaattagataaacataaaaaatat
acaattgatatcttagtagatcgaattatcttaaatacagaaaatagatcaagaatttat
gaaagtttagggttagctacaaaatatgctgatggtttagtaagtgttgaaaaccttaca
gaaaaaaaggaagaattatattctcttaaattaggttgtaaacatggtgatttttcaatg
ccaaaaattgaaccaaaattattttcttttaattcacctttaggagcttgtaataaatgt
aatggattaggatttattcagcaagtaacttgagaaaaaatggtggatcaagataaaaca
atattagagggaggaattaaatattttggtgataaattatcaggatataattgagaaaaa
tttattgttttattaaaagaatataatatttcgcttgacaaaaaattaaaagactttaca
gaaaaagaacaagagattattttatatggttcaaaagaaccaattaattttaaagtaaaa
acaaaatctcttacagttcgtaaatatgattatattgagggacttgctacaatgattgaa
agattaaatcttgaaacagcatcagattttgcaagaaactattataaacaattttttgca
acaagtacatgtgataaatgtaatggatcaagactaaatcaacatgctcttgctgtaaaa
attaatcataaaaatatttttgaggttactgcactttcaattgaagaagcaaataaatga
attaaagatcttaaattaagtgaacaagaattaaaaattgtaaatcttgtaattagtgaa
attaaatcaagatttaaatttttaataaatgttggattaggatatcttactttaaatcga
atggctaatactctttcgggaggagaaagtcaaagaataagattagcatcacaactaggt
tcaaaacttaccggtgttatttatgtattagatgaaccatcaatcggacttcatcaaaga
gataatgaaaaattaattaatactttaaaagaaattagagatttaggtaatactgttgtt
gttgttgaacatgatgaagaaatgatgcttgaatctgattatttaattgatattggtcct
gatgctggaatttatgggggaaaagtaattgctacaggaacagcagaagaagtcgcaaaa
aaagaaacacatactggaaattttctttcaggaaaagatcaaatagaaattccgaaaaag
cgaagaaatatttctgagcaaaaatatcttgaaatatatggagcaaaagcaaataattta
aaaaacatcaatgtcaaaattcctcttaaaaaatttgttgttgtctctggtgtatctgga
tcaggaaaatcaactcttgtaaatgaaataatttacaaaaaattacataatctgacttcg
catggaaatcattttgatattcctggtttatgtgatgcaattaaaggtgtcgaaaatatt
gataaagttgtaagaatatcacaagatcctattggtaaaactcctcgttctaatcctgtt
acttataccagtgttttttctgatattcgtgaacttttcgcaagtacaaatgaagcaaaa
ataaaaggctatgctgcaggaagattttcatttaatgtaaaaggtggaagatgcgaaaaa
tgtcaaggtgatggaattttacgaattccaatgcattttcttcccgatgtttatgtaaaa
tgcgatgaatgtaatgggaaaagatataacgaagaaactttacaaattacttttaaagat
aaaaatattgcagatgttttagatatgtcagtagaagaagcgaatatcttttttaaaaat
caaccaaaaattagtagaaaacttaaatatttaaaagatgttggtcttgattatattaaa
ctaggacattcttctactttactttcaggaggagaggctcaaagagtaaaacttgctact
tatttacaaaaaaaagcaacagggaaaactttatatattttagatgaaccaacaacagga
ttacatcatcatgatattaaaaaattattggtagttttaaataagattgtcgataatggt
gattcaattcttataattgaacataatttagatgtaattaaagttgctgatcatattata
gatatgggacctgaaggaggaaatcatggaggaaaagttattgctcatggtacccctgaa
gagatttcaaatagtaaaatttctgaaacaggaaaatatcttaggtatattttaaaatag
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