Haliotis cracherodii (black abalone): 139442048
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Entry
139442048 CDS
T10814
Name
(RefSeq) protein trachealess-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcra03000
]
139442048
Transcription factors [BR:
hcra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139442048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
139442048
NCBI-ProteinID:
XP_071078929
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MSSKTEKGDGHRDTDIDQGEGMSVVHDRVHTRGHQSNAQSQLFATAGCSPTSYKDAWIFD
MANPAKHSILEMRKEKSRDAARSRRGKENYEFYELAKLLPLPAAITSQLDKASIIRLSIS
YLKLRDFSGHGDPPWVRDGPPPNKSVKGPSRRRNLSAVAMEIFETHQGTHILQSLDGFAF
ALANDGRFLYISETVSIYLGLSQVEMTGSSVFDYVHQQDHPELAEQLGLCLPQNISGSNI
PSPGSTSDEGSCTSNAPRSGSPPLHDRGYVMNPSPNKGYDRCFCLRMKSTLTKRGVHVKC
AGYRVVHIVGQHRPQFSFSVNRKHPPPVLGFIALGIALPPPTITELRIDNDTFVMRLSPD
FKIIYCEPIVSDLMDIQADDLTNGLLYDFCHAADLHKLRKAHVDLLAKGQVLSEYYRVMN
RHGGYVWIQTCATTLFNSKSIDDQNIIAINYVLSGIENDRLVLDSWQLNGRRTLGPDPSD
HSDPGELGSDPDGSSPVDRENRTNGDSKSESAGPTSDQDDRLKSPSSNALGEMDDLGSDA
HNSKAGLDRVFSDKSACTVIDRVDSVRDGKFSRRKMEKPRKRKKEFELEDDDTDKESDMM
KSQRIISEDSLCDFVGNNVAQDLSPGTRSPDIGPVTMTSATPQDLSLKANVVGSQSVVAI
HGEVHSDWKRGKDMDCHGAVTPNSVKELEAVMNRHLPSVSNQSESTQHLRFSGQSAQKKS
TIQWIGSQHSNNNTGEALPATNLLRTIYANRESVIRTNTRPASNYYSEMPVNMLTPPGSD
AFKEQQQQQQQQQQQPSFISTKPTVASGSHYPNATMPNYTTTPLSVSMPSTAVDSYGMTP
PSSVSPRDKLQSPFGDVGTYNESGSASCGNLAPDSSSSRLAAKQAYQLSSSSSEFSTSKS
TPSSSASSAAAAAAYYSVSSFHNNHTYPEVNHNGSAGINSYEPCSRSVLSWYPVSYSS
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaagaccgagaaaggggacgggcacagggacacagacattgatcagggggag
ggcatgtccgtggtccatgatcgcgtccatacacgtggtcaccagtcgaatgctcagtct
caattatttgccactgctggttgttcacctacttcctataaggatgcctggatctttgac
atggccaacccagccaagcacagtatcctagagatgaggaaggagaagtcacgagacgca
gcgcggtcccgccgtgggaaggaaaactatgagttctatgagttggccaagttgcttccc
ctgccggcggccatcacaagccagttggacaaggcctccatcatccgactctccatcagc
tatctcaaacttcgagacttctcaggccatggagatcctccgtgggttagagatggtccc
ccgcccaataaatctgtgaaagggccatcaaggagaagaaacttgtctgcagttgccatg
gagatttttgaaacacatcaggggacacacatattacagtcactggatggatttgccttt
gctcttgcaaatgatggtcgattcctgtacatatcagaaacagtgtctatataccttggt
ctttcacaggttgagatgactggcagcagtgtgttcgactatgtgcatcaacaggaccac
cctgaactggcagagcagcttggcctctgtcttccacaaaacatatcaggcagcaacatc
ccatcccctgggtccacttctgatgagggatcctgcacctccaatgctccacgatcaggc
agtccgccattacatgacagaggctatgtgatgaaccctagtccgaacaaaggctatgac
aggtgcttctgtttgcgcatgaagtcaactctgaccaaacgaggagtacacgtaaagtgt
gccgggtacagggttgtgcatattgttggacagcaccgtccccagttttcgttttcggtg
aaccgcaagcatccaccacctgtcctggggttcatagctctcgggattgcccttcccccg
cccacaatcacagaactgaggattgacaacgatacctttgtcatgagattatcacctgac
ttcaaaatcatctattgcgaacctattgtctctgacctgatggacatccaggcggacgac
ctgaccaatggcctcctgtatgacttctgtcatgctgcagacctccacaagctcaggaag
gcacatgtagacttgttagccaaaggtcaagtcttgtcagagtattatcgagtgatgaat
cgtcatggcggctatgtctggatccaaacctgtgctacaaccctgtttaattccaaaagt
atcgatgaccaaaatatcattgcaattaactatgttctcagtggtatagaaaatgatcgg
ttggtgttagactcatggcagctaaatggcaggaggacactggggccagacccctctgat
cacagcgacccaggggaacttggatctgatccagatggcagcagtcctgtagacagagag
aacagaacaaatggcgacagcaaatctgagagtgcgggacctacttctgaccaggacgac
cgactcaaatctccgtccagcaacgcattaggcgagatggatgaccttggtagtgatgca
cacaacagcaaggccgggcttgaccgtgtgttctctgacaagtctgcatgtacagttata
gatagggtagattcggttagggatgggaaattcagcagacgcaagatggagaagccccgc
aagcgcaagaaggagtttgaacttgaggacgacgacactgataaggagagtgacatgatg
aaatctcagaggattatcagtgaggactctctctgtgactttgtgggcaataatgtggct
caagacttatccccaggcacccggagcccggacataggtccagtgactatgacctccgcc
actccacaggacctgtctctcaaggccaatgttgtaggcagccagtctgttgtggccata
catggtgaagttcattcagactggaagagggggaaggacatggactgccatggtgcagtc
actcccaactctgtgaaggaactggaggcagtcatgaaccgccatcttccttctgttagt
aaccaaagtgaatccactcaacatttacgctttagtggtcaatctgcgcaaaaaaagtcc
acaatacaatggataggttcccaacattctaataacaatactggggaagctctcccggct
acaaatctgctcagaaccatctatgccaatcgcgaatctgtcatccgcacaaatacccga
ccagccagtaattactacagtgaaatgccagtgaacatgctgaccccaccgggcagtgat
gcattcaaggaacagcaacagcaacagcagcaacaacagcagcagccatcattcatctcc
acaaaaccaactgtagccagcggcagccactaccccaacgccaccatgccaaactacacc
accacccctctctctgtctctatgcccagtacagctgtagactcctatggcatgactcca
ccatcatctgtatcacctcgagacaaactgcagtcgccatttggtgacgtaggaacgtat
aatgagtcgggttcagcctcgtgtggaaacctggctcctgattcatcttcttccagattg
gcggccaaacaagcatatcagttgtcatcatcatcttcggagttctccacctccaagtca
accccatcatcatcagcatcttcagcagcagcagcagcagcatactacagcgtgtcatcc
tttcataacaaccatacctatcctgaagttaaccacaatggctctgcagggatcaactcg
tacgagccatgttcccgatcagtgttgtcatggtacccggtttcgtattcatcataa
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