Haliotis cracherodii (black abalone): 139442142
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Entry
139442142 CDS
T10814
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139442142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139442142
03016 Transfer RNA biogenesis [BR:
hcra03016
]
139442142
Enzymes [BR:
hcra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
139442142
Messenger RNA biogenesis [BR:
hcra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
139442142
Transfer RNA biogenesis [BR:
hcra03016
]
Prokaryotic type
tRNA degradation factors
139442142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
GIT1_C
Motif
Other DBs
NCBI-GeneID:
139442142
NCBI-ProteinID:
XP_071079046
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAAPMRACECLCKCTGGPYARIRYLLQFKRRSHSNPWKSGDYGATVETEIGNRPFKISSG
KLARFADGTAVAQHGDTSVLVTAVSRDRSVQQNFVPLTVDYRQKAAAAGRIPTNYLRREI
GPSDSEVLTSRLIDRSIRPLFPQGFYNETQIMCNLLAVDGMNDPDIISINAASAALAVSH
IPWNGPVGAVRVGLIDNEVVVNPTRRQMFQSTLNLVITGSEHDKVVMLEASANNVYLQDF
QKAVKYGLKETQAIIRQIKKLQNQIGQEKKEVPPVSAPSEQITSIVKSLAELKLRDIFTD
SSHDKISRDVAVRKVRTEVVRDVQESLLQNGASPQSTDQPEVDAQAIHQAFDALSKEIFR
NLILDEHKRCDGRGLRDLRDISCQVDLYKPLHGSAIFQRGQTQVLCTVTFDSLDTAFKSD
PMSVVAGGLKEKNFMLHYEFPPYATNETGRIGASKRRELGHGALAEKGLRPLIPSNFPFT
IRLTSEVLESNGSSSMASVCGGSLALMDAGVPISDAAAGVAIGLVTRTDPEKSDILEYKL
LTDLLGIEDYLGDMDFKLAGTKKGITALQADIKLSGIPAKIVMEAIQQAADAKYEILKIM
NNTLAKPRSSRKENGPVTETLQVPPHKRPRFVGAGGYNLQKIRSQTGVTITNMDETTFQV
FAPNKDAMEEAREIIDELLQDNVPEFEFGAICTGKIVEIKEYGVMVELHPRLQPVLIHNS
QLDMRKVNHPSVLGLEVGQEIRAKYFGRDPANGRMRLSRKVLQTTSR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccatgagagcgtgtgaatgtttgtgcaaatgcaccggcgggccctatgca
cgtatacgatatttattacaattcaaaagaagatcacattcaaacccatggaaaagtggt
gattatggggcaacagtcgaaactgaaattggaaataggccattcaagatctctagtggg
aagctggccaggtttgctgatggcactgcagttgctcagcatggtgacacatctgtgctc
gtgactgctgtcagccgtgacagatctgtccaacaaaactttgttccattgacagttgac
taccgtcagaaggctgctgcagcaggccgcatcccaaccaactaccttcgacgagagatt
gggccatctgatagtgaggtcctcacaagcagactcattgatcgatctatcagacctttg
tttcctcagggcttttataatgaaactcagataatgtgcaacttgcttgcagttgatgga
atgaacgacccagacattatcagtataaatgcagcttcagcagccctggcagtgtctcat
attccgtggaacggccctgtaggtgctgttagagtgggacttattgacaatgaagtcgtt
gttaaccctacgcgacgtcagatgtttcagagtacgctcaatctggtgataactggttca
gagcatgataaagtggtaatgctggaagcctcagccaacaatgtctacctacaagacttc
cagaaggctgtgaagtatggcttgaaggaaacacaagccatcataagacagattaaaaaa
ctccagaatcaaattggtcaggaaaagaaggaagttccgccagtctctgcaccctcggaa
caaatcacaagtattgtcaaaagtcttgcagaattaaagttgagggatattttcacggac
agttctcatgacaaaatatcaagagatgtagctgtgaggaaagtcagaacagaggtcgtg
agagatgtacaagagtccctgttacagaatggtgcatccccccaatcaactgatcaacca
gaagtggatgctcaggccatacatcaagcatttgatgctctgtcaaaagaaatatttagg
aatctcattctggatgaacacaaaagatgtgatgggcgtggtctgagagacctgagggac
atatcctgtcaggtcgacctgtacaagccactgcatgggtctgccatcttccagagggga
caaactcaggttctgtgcactgtgacattcgacagtctcgacacggccttcaagtccgac
cccatgtctgttgtggcaggaggtcttaaagaaaagaatttcatgttgcactacgagttc
ccaccttatgccactaatgagaccggccggatcggtgccagcaagaggagagagttgggg
catggtgcgctggcagagaaagggttgaggcctctgataccctccaacttccccttcacc
atcagactgacatccgaggtgttggagtcaaatggttcttcctccatggcatccgtgtgt
ggtggtagtcttgccttgatggatgccggggtcccaatctcagatgctgctgcaggggtg
gctattggactggtcactcgcactgatcccgagaagtcagacatattggaatacaagctg
ttgacagacttgctgggcattgaggactacctcggtgatatggacttcaaactggctgga
accaagaagggaatcacagccctacaagctgacatcaagttgtccggaattcctgctaag
attgtgatggaagctatacagcaagcagcagatgcgaagtatgagatattgaagattatg
aacaacacactggctaaaccacgaagttctcgcaaagaaaatggtcctgtaacagagaca
ttgcaggtaccgccacacaagaggccgaggtttgtgggagcgggcggctataacctgcag
aagatccgcagtcaaacgggggtgaccatcactaacatggacgagaccaccttccaagtg
tttgcccccaacaaggacgccatggaagaagcacgggagatcatcgacgaactgttgcag
gataatgtgccagagtttgaatttggtgctatatgtacagggaagattgttgaaatcaaa
gaatatggtgtgatggtagagctccacccccgactgcagcctgttctcattcacaactct
cagctggatatgaggaaggtgaaccacccatctgtgctggggcttgaggtggggcaggag
atcagggccaagtacttcgggcgggacccggccaacggtcggatgcggctatctcggaag
gttctacagaccactagcagatag
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