Haliotis cracherodii (black abalone): 139442163
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Entry
139442163 CDS
T10814
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03022
Basal transcription factors
hcra03420
Nucleotide excision repair
Brite
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139442163
Transcription machinery [BR:
hcra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139442163
Chromosome and associated proteins [BR:
hcra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139442163
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139442163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139442163
NCBI-ProteinID:
XP_071079059
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVEGLLVYFPYDYIYPEQYLYMVELKRSLDAKGHCALEMPSGTGKTVSLLSLIISYM
RAHPLEVSKLIYCSRTVPELDKVVEELRNLMKYYEKETGEVPNLLGLALSSRKNMCVHPE
IGRERDGKVVDGRCHNLTASFVRTRHKTDPTVPVCDFYESFDQHGREAPLPPGVYSLDDM
KDYGRKKEWCPYFLARYALSHANVVVYSYYYLLDPKIAETVSKELSKTAVVVFDEAHNID
NVCIESMSVMLTRRTLDRCSQNIEALNKHIDRMKASDAQKLKTEYQRLVDGLRDASVARE
TDVILANPVLPDEILQEAVPGNIRTAEHFLGFMKRFCEYMKTRLRVQHVVSESPPSFLKD
CLNKVCIERKPLRFCAERLKSLMRTLELADTQDVSAVTLLSNFATLVSTYAKGFVLIIEP
FDDRTPTINNPILYFSCMDASIAIKPVFDRFQTVVITSGTLSPLDMYPKILDFRPVTMAT
FTMTLARTCICPLIVSKGNDQVAMSSKFETREDIAVIRNYGNLLVELSTIVPDGVACFFT
SYIYMETIVASWYEQGIIDQVQKHKLLFIETQDAAETSLALLNYQKACENGRGAVLLSVA
RGKVSEGIDFDHHLGRAVVMFGVPYVYTQSRILKARLEYLRDQYQIRENDFLTFDAMRHA
AQCMGRALRGKTDYGIMVLADKRFARADKRGKLPRWIQEHLNDHFCNLSIDEAIQVSKKF
LRMMAQPFSREDQLGLSLLTLEQLQAEDMQKKLESKMQYV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaatgtagagggcctgttagtgtactttccctatgattacatctacccagag
cagtatttgtacatggtggagctcaagcgttctctggatgcaaagggccactgtgcactt
gagatgccatcgggaacaggcaagacagtgtcactgctctcgctgatcatctcctacatg
agggctcaccctctggaggtcagcaaactcatctactgctccagaacagtgccagagctg
gataaggttgtggaagagctgcgtaacttgatgaagtactatgagaaggaaacaggcgaa
gtccccaacctgcttggtctggctctcagttcccgtaagaacatgtgtgtccatcctgag
attgggcgtgaaagagatggtaaggtggtggatggccgatgtcacaatctaacagcatcc
tttgtcaggacccgacacaagacagaccctactgttccagtttgtgacttctatgagagt
tttgaccaacatgggagggaagcacctttgccgcccggtgtatacagcctggatgatatg
aaagattatggcaggaagaaagaatggtgtccatatttcctggccagatacgcactctcc
catgccaatgtggtagtttacagctactactatctactcgaccccaagattgccgagaca
gtgtccaaagaactgtcaaaaacagcagttgttgtgtttgatgaagcccacaatatagat
aatgtctgtatagagtcaatgagtgtgatgttgacaagacgaacattagacaggtgctcc
cagaatatagaggctctcaacaaacacattgacaggatgaaagccagtgatgcccaaaag
ttaaagacagagtaccagcgactggtggatggattgagggatgccagtgttgccagggaa
accgatgtcatccttgccaatccagtactaccagatgaaattctacaagaggcagttcca
gggaatattcgaacagcggaacactttctcgggttcatgaaacgtttttgtgaatacatg
aaaaccagactacgagtgcagcacgtggtatcggagtctccaccctccttcctcaaagac
tgtctgaacaaagtctgcatcgagaggaagcccttgcgattctgtgctgagaggttaaag
tccttgatgaggaccctggagctggcagacactcaggacgtctccgcagtgacactgctc
tccaactttgccacacttgtcagtacttacgctaaaggatttgtcttgatcatcgagccc
tttgatgaccgcaccccaacaatcaacaaccccatcctgtacttcagttgcatggatgct
tctatagccatcaagccggtgtttgaccgattccagacagttgtcatcacgtccgggaca
ttgtcacctctagatatgtatccgaagattctagatttccgtccagtaaccatggcaaca
ttcacaatgacactcgccagaacctgcatatgcccactgattgtgagtaaaggaaatgat
caagtggccatgagctccaagtttgagacaagggaagacatagctgtgattcgaaactat
ggcaatcttctggtggagctgtcaacgattgtacctgatggagtagcatgtttctttacc
agctatatttacatggaaacgattgtggcatcgtggtatgaacagggcatcatagaccag
gtgcagaagcacaagctgctgttcatcgagacacaggatgctgcagagacctcgttagct
ctgctgaactatcagaaggcgtgtgagaatggccgaggagctgtgctgttgtcagtggct
agaggaaaagtatcagagggtatcgactttgaccaccatttgggccgggctgtcgtcatg
tttggtgtgccatacgtctacacgcaaagcagaatcctcaaggcccgtcttgagtatctg
cgagaccagtaccagatacgtgagaatgacttcctgacatttgacgccatgcggcatgca
gcccagtgcatggggagagctctccgagggaaaactgactacggcatcatggttcttgca
gacaagagattcgcaagggcagacaagcgcgggaagctgcctcgatggatccaggagcac
ctgaatgaccacttctgtaacctttccattgatgaggccatccaggtgtccaagaagttc
ctacggatgatggctcaaccattcagcagggaggaccaactggggctgtcccttctcacc
ctagaacaactccaggcagaagacatgcagaagaagctggagtccaagatgcaatatgtc
tga
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