Haliotis cracherodii (black abalone): 139442752
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Entry
139442752 CDS
T10814
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcra04121
]
139442752
Enzymes [BR:
hcra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139442752
Ubiquitin system [BR:
hcra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139442752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_4
DUF5711
NHL
ANCHR-like_BBOX
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
SGL
DUF3584
DUF2180
Motif
Other DBs
NCBI-GeneID:
139442752
NCBI-ProteinID:
XP_071079744
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAGMLPDRSVVDSHHNDFLTCGICQELFTDPRILPCLHSFCFKCICTHQESHQSEHRPPL
CPECREPISVEADSFKKNFFINGLAELVRSKRAKSMQCTPCGLKGRSSPAEMKCLNCGDG
LCTDCSDGHNASTQTHGHQIVSVADLREGLHDETFRRLQRIQCQQHQDKDVEYFCQSCHL
PVCIACVILLHKDHNTQPITEAVSPLKSMMKSKVEIIRKKFKEVSKQEMSILSLTKALKI
KRELETSRIEENAEREIAKIKSRQHDSLRKLSTETKEIEKEHNTMLQELSQQKNRIGSCV
DFCDSILETGKDDELLMLKTTIMDRLQQLKGHAMAIHKTDALTVAKDDEQNEKQDEMQDI
RQTPQSEASVSQTRSIPSRYNMKFQRTFSAKFKGDTKNPNIKGTAYSFGAGLLISDLANK
KVKMINSCGKLKQEITVDGFYPRAIAVAGDIIAVVSENYLCIFTLKGHLRTKVKLNKNKP
DEGLPFTYSLAASDDVGIVVGNIPGDKRLHVYDLDGTMKRYLDCNIRFPLASLSVTPERD
IVMSEWGSGSLRVLSSGGKDRWSSREYDTGWKPNGTCVSRDGTIFVADYDWGGVRVYSSS
GKKCLQYKTIRDGLHYPSHVAFDEEGSLYVIDAKDRINKYTV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatgttaccagatcgatcagttgttgattcacaccacaatgacttcctgact
tgtggcatctgtcaagagttgttcacagatcccagaatcctgccctgcctccattccttc
tgctttaagtgcatatgcacgcaccaagagtcacatcagtctgaacacagaccaccactc
tgtccagagtgtcgagaaccaatttcagttgaggcagattccttcaagaaaaatttcttc
atcaatggactcgctgaacttgtaaggtctaagagagccaagtcaatgcaatgcacgcca
tgtgggttgaaaggacgatcctccccagcagaaatgaagtgtctcaactgcggcgatggc
ctctgtacagactgttccgatggacacaatgcttcaacccaaacacatggtcatcagatt
gtttctgtagcagacctcagggaaggactgcatgatgaaacgttcagacggttacagaga
attcaatgtcaacagcaccaggacaaagatgtggaatacttttgccaatcttgtcattta
ccagtctgtatagcatgcgttattctcctccacaaggaccacaacactcaacctatcaca
gaagctgtaagccctttgaagtcaatgatgaagtctaaggttgagatcattcgcaaaaaa
ttcaaggaagtttccaaacaagaaatgagtatcttatctttgacaaaagcattaaaaata
aaaagagaattagagacatctcgcattgaagaaaatgcggaacgagaaattgcaaaaata
aaaagcagacaacacgattcactgagaaaactttccactgaaacgaaagaaatagaaaag
gaacacaacaccatgttacaagaactctcgcaacagaaaaataggattggcagttgtgtc
gacttctgtgacagcatcctggagacaggcaaggatgacgagttactgatgctgaagacg
accattatggacagactccaacagctcaaaggacatgccatggctattcacaagacggat
gcattgactgttgcaaaggatgatgaacagaacgagaaacaggacgaaatgcaagacatc
cgtcagacaccacagagtgaagccagtgtatcacagaccagatctattccatcaagatac
aatatgaaattccaaagaacattttctgcaaaatttaaaggtgatacaaagaaccctaac
atcaaaggaacggcatacagtttcggtgctgggctgttgatatcagatctagctaataaa
aaggtcaagatgatcaactcttgtggtaagttgaaacaagaaatcaccgtggatggattc
tatccccgtgcaattgctgttgctggggacatcattgctgtggtcagtgagaactatttg
tgtattttcactttaaagggtcatctacgaacaaaggtcaaactgaacaagaataaacca
gatgaaggtctacccttcacatacagtctagctgcgtctgacgatgttgggattgtggtt
ggcaatattcctggtgacaaaagacttcacgtctacgacctggatggcacgatgaagagg
tatttagactgcaacatccggttccccctggcgtctctgtcagtcacccctgaaagggat
atagtcatgagtgaatggggaagtggaagtctaagagtcctatcaagtggagggaaggac
aggtggagcagtagggaatatgatactgggtggaaacccaatgggacttgtgtgtcacgt
gatggaaccattttcgttgcggactacgattggggaggagtccgcgtttatagctcaagt
ggtaaaaaatgtcttcagtacaaaacaatacgtgatgggctgcattatcccagtcatgtt
gctttcgatgaggagggatcactctatgtgatagatgctaaagataggataaataaatac
accgtatga
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