Haliotis cracherodii (black abalone): 139442889
Help
Entry
139442889 CDS
T10814
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03013
Nucleocytoplasmic transport
hcra03015
mRNA surveillance pathway
hcra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139442889
09122 Translation
03013 Nucleocytoplasmic transport
139442889
03015 mRNA surveillance pathway
139442889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139442889
03041 Spliceosome [BR:
hcra03041
]
139442889
03009 Ribosome biogenesis [BR:
hcra03009
]
139442889
03012 Translation factors [BR:
hcra03012
]
139442889
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139442889
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139442889
mRNA cycle factors
Stress granule specific factors
139442889
Spliceosome [BR:
hcra03041
]
Complex C
Other components
EJC/TREX
139442889
Ribosome biogenesis [BR:
hcra03009
]
Eukaryotic type
90S particles
Helicases
139442889
Translation factors [BR:
hcra03012
]
Eukaryotic type
Initiation factors
eIF-4
139442889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
139442889
NCBI-ProteinID:
XP_071079897
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MASRRVLPDDLRNVEFETSEDVDVTPTFDNMGLREELLRGVYAYGFEKPSAIQQRAVKPI
VKGRDVIAQAQSGTGKTATFSISILQCLDTQVRETQALILSPTRELATQIQKVILALGDY
MNVQCHSCIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLILDEADEM
LNKGFKEQIYDVYRYLPPATQVLLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDSIMKEFRSGSSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggcgtgtgctcccagacgatttaagaaatgttgaatttgaaacaagtgaa
gatgtcgacgttacacctacatttgataatatgggtcttagagaagagttgttgaggggt
gtatatgcttatggttttgaaaaaccgtcagctattcaacagagagctgtgaagccaata
gtgaaaggtcgagatgttattgcacaggcacagtctggaactggtaaaacggccacattt
tccatcagtatccttcagtgccttgacacacaggtgcgggagacacaagcccttattctc
tcacccacgagggagcttgcaactcaaatccagaaggttatccttgcccttggagattac
atgaatgtgcagtgtcattcatgtattggaggtacaaatatcggtgaagacattcgtaaa
ctggactacggacagcatgtggtttctggaacaccaggcagagtctttgatatgatcagg
aggaggaatcttcgcacaagatctattaaaatgttgattcttgatgaagctgatgaaatg
ttaaacaagggattcaaagaacaaatctatgatgtgtatcggtacctgccaccagcaacc
caagtacttctcatctctgctacacttcctcacgagatcctggagatgaccagcaagttc
atgacagacccaatcagaatcctggtcaaacgtgatgagttgaccttggaaggcatcaag
cagttcttcgtggcagtagagagagaggagtggaagtttgacacactctgtgatctgtac
gacaccctcaccatcacacaggcagtcatcttctgtaacaccaagagaaaggtggactgg
ctgactgagaagatgagggaggccaacttcactgtgtcatccatgcatggtgacatgcca
cagaaagagagagattccatcatgaaggagttcagatcaggatccagtcgcgtcctcatc
acaactgatgtttgggcccgaggtattgatgttcaacaggtgtctctcgtcatcaactat
gatctgccaaacaacagagaattgtacattcacagaatcggccgatcaggtagatttgga
aggaaaggtgtggccatcaactttgtaaagaatgatgacatcagaattctgagagatatt
gaacagtactactcaacacaaattgatgaaatgcccatgaatgttgctgatctgatctaa
DBGET
integrated database retrieval system
