Haliotis cracherodii (black abalone): 139444776
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Entry
139444776 CDS
T10814
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcra04121
]
139444776
Enzymes [BR:
hcra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139444776
Ubiquitin system [BR:
hcra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
139444776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
Sina_ZnF
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-TRAF
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-RING_6
PDZ_Tricorn
IBR_1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139444776
NCBI-ProteinID:
XP_071081826
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MGFDTEKFVNGITDDKKCALCHGVLDNPVRAPCQHVFCSGCILPWVVRHGSCPLKCQTLT
PGDLENVLPLRQVILHLRVKCDFAERGCTEILRLTDLVDHTQECQHRPVGCSNPGCGVVV
SFKDLGDHEGTMCQYRPVGVCQIGCGLVLFQNTSEEHDCVGALKNHINNQNLKVGGLEQE
IKRISFKFTKREKALLTQVSSLHSEIQLQALRFQRKLNDYKNQLARLTKLEQEITKGSTE
DTGFTVTLGRDGEASLGFNIMGGFTPENNNNQTVSDGIVVSRVTENGPADNNGLKTYDRI
IKVNGQDLSQSSHEAAVEAFRTAKEPIVVEVLRRVNKNKMKNRSPTMVSIGTQTEEDFYC
YNRPPTPPPGFYPLHVSGLYQPSSRRPVAFSPSADMGLTDIEMSHNLDFDDPYFDDRPYE
MEYEEVVLHRVSSEEKLGLTLCYGSLEDEVTDIFISENDANRCFQTIEKIDPNSIAAKDG
RIREGDQILQINGVDVHNRDQAIKLFSDQGADITLLVARPQLQCDDGFMDEHNMVLDDLH
MDLLEKHHHDNMAYMAHMLARRNLDEEGGTTDTATTENSNKHEKDSGVGRTDESTKNDES
SEQETFDIECLTPPTHMKFPPVCNLNREGLHHSNESVTSNEPELMSNDISAEACDQFRQV
LQHRCVKGERSPKKEGKRKDSGSSIERELHLLNREMEEINLECQEIVDSHIKDQMKLDHH
RDIFKIEPQKSPRIVPRMGTRLEYLKHVQSLDPSELLIRRSAPSMKMGQQNVKSSEREKD
TSTTSAYNTGESCRSTPLTLELNQASDDGDRGFKNSMLCLAPGPAIPSSSDTEKQTQTPT
KSRDYSSDDSGHGYKGIVPVPVQPQTNGNSGGLKDHIHMGESLQDLYIQYADVMYTNRAN
LEHTIAIQQKLFQQQMDQKHRTRSLSKPSSVSKSVDGESTKSVQGKDATQSESGAMEWVV
KRRPDGTRYITRRPVRNKILKERAKKISEERCGMTTDDDAMSEMKTGRYWTKEERKRHLE
KAKDYKKKKELMIKARMETLKEAEEKKEANIVELSHRKMNKHKGKKVLDNFVTVQEMLAH
GSRVQDGKTYNPLLSVTTV
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacacggaaaaatttgtcaatggaataactgatgacaaaaaatgtgcactt
tgtcatggagttttagacaatccagtccgcgcgccgtgccaacatgtgttttgttcgggg
tgcattcttccctgggtggtgcgccatggaagctgccccctcaagtgtcaaaccctcacc
ccaggggacttggagaacgtgctgccgctcaggcaggtgattctacaccttagggtcaag
tgtgacttcgcggagcgtggatgtactgagatattgcgactgacagatttggttgaccat
actcaggaatgtcaacaccggcctgtgggttgcagtaaccccgggtgtggggtggtggtc
agcttcaaggacctcggggaccacgaggggaccatgtgtcagtataggcccgtgggggtg
tgtcagattgggtgtggtctcgtccttttccaaaatacgtcggaagaacatgattgtgtt
ggggcgcttaagaatcatattaataaccaaaatctgaaagttggaggattggagcaggag
attaaacgcatctcgttcaaattcacgaaaagagagaaagctcttttgacacaagtgtcg
agcttacatagtgaaatacagctccaagctctcagattccagaggaaactcaacgattac
aaaaatcaacttgctagactgacaaaactcgagcaagaaattaccaagggctcgacggag
gacactggcttcactgttaccctgggacgtgacggagaagcatcgctcggattcaatata
atgggaggcttcacgcccgagaataacaacaaccagactgtttcggatggcatcgttgtg
tctcgagtcacagagaatggacctgcagataataatggcttgaagacctatgacagaatt
attaaggtgaatgggcaggatctgtcacaatcaagtcatgaggcagcggtagaagcattc
cgcacagccaaggagcctatcgtggtggaggttttacgtagggttaataagaataagatg
aaaaatcgttctccgacaatggtgtcaataggtacgcaaacggaggaggacttttactgc
tacaaccgaccgccaacaccaccgccagggttctaccccctgcatgtcagtggtttatat
caaccgtcgtcacggagacctgttgccttctcgcctagtgctgacatgggattaacagac
atcgagatgtcacacaatttggactttgacgatccctactttgatgaccggccgtacgaa
atggaatacgaggaggtggtgctgcaccgggtgtcaagtgaggagaagctaggtctgacc
ttgtgctacgggtccctggaggacgaggtcacagatatattcatcagtgagaatgatgct
aaccgctgcttccagactatagaaaagatcgatcccaacagtattgctgccaaagatggc
cgaatacgagagggggaccaaatcttgcagatcaatggagttgatgttcacaatcgtgac
caagccattaaacttttctctgaccaaggagctgacattaccctgctcgttgctcggcct
caattacagtgtgatgatggcttcatggatgaacacaatatggtgttggatgatcttcac
atggatttactggaaaagcatcaccatgacaacatggcttacatggcccatatgctggca
aggcgcaacttagatgaagaagggggaactactgacactgccactactgagaactccaac
aaacatgagaaagacagtggtgttgggcgaactgatgaaagtacaaaaaatgatgaaagt
tctgaacaggagacgtttgacatcgagtgcctgactccgcccacacacatgaagtttcct
cctgtttgtaatctgaatcgggaaggactacatcacagtaatgagagtgtcacatcaaat
gagcccgagcttatgagcaatgacatttctgcagaggcttgtgatcagttccgtcaggtg
ctacaacaccgttgtgtcaaaggtgaaagatcaccaaagaaggaaggcaaacgtaaggac
tctggaagcagcatcgagagagagctgcatctcctcaatcgagaaatggaggagataaat
ttagagtgtcaagaaattgtggactcgcatattaaagatcagatgaaactggatcatcat
agagacatcttcaaaattgagccacaaaaaagtccacgcattgtgccccgtatgggaact
agactggaataccttaaacatgtgcaatcccttgatccctccgagctcctcatccggaga
agtgcgccctctatgaagatgggccagcagaatgtgaagagctccgagcgggagaaagac
acgtcaactacgagtgcatacaacactggtgaaagctgtcggagtacccccctgacacta
gaactcaaccaggctagtgatgatggggatagaggcttcaagaattcaatgttgtgttta
gcccccggtcctgcgatcccatcgtccagtgacacagagaaacagactcaaacaccaacc
aagtcacgggactactccagtgatgacagtggtcatggctacaagggcattgtgcctgtg
cccgtgcagcctcagaccaatgggaatagtggtggactcaaagaccatatccacatggga
gaatctcttcaggatttgtacattcaatacgctgatgtcatgtacacaaatcgagcaaat
ctggaacatacaattgcaatccaacagaaactgtttcagcagcagatggaccagaaacat
cgcactcgctccctatcaaagccatccagtgtcagtaagtcagtggacggagagtccacc
aagtctgttcagggtaaagatgccacccaatcagaaagtggtgctatggagtgggttgtc
aaacgtcggcctgatggcacgcgttacatcacccgacgacctgtccgaaacaaaatcctc
aaagaacgagcaaagaaaatctcagaagagcgctgtgggatgaccacggacgatgacgcc
atgagcgagatgaaaactggaaggtactggacgaaggaagagaggaaacgccacttggaa
aaggcgaaggattacaagaagaagaaagagttgatgatcaaggcaagaatggaaactctg
aaagaagccgaagagaagaaggaggcgaatattgttgaactgagtcatcgcaagatgaac
aaacacaagggcaagaaagtccttgacaactttgtgactgtgcaggagatgcttgcccat
ggtagtcgggttcaggatggaaagacttataaccctctactgtccgtcacaactgtatga
DBGET
integrated database retrieval system
