Haliotis cracherodii (black abalone): 139444871
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Entry
139444871 CDS
T10814
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139444871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ACBP4_C
Laminin_II
DUF948
Motif
Other DBs
NCBI-GeneID:
139444871
NCBI-ProteinID:
XP_071081967
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MEFSLFYVTLCCIVLKDVVGQSQRQRHCEQGSCYPATGDLLIGRGKQLRATSTCGMVKPD
RYCVVSYLEKRTKCFQCDSREPWQSRVHENSHRIENIVSSFKDRRDRWWQAENGVENVSI
QLDLEAEFHFTHLIMTFKTFRPKSMFIERSYDFGKTWKVYRYFAQSCRKSFPGIPRGPVR
SMTDVICQTKYSAETPSTQGEVIFRVLPPFIPIKDPYSEQVQDLLKLTNLRVNFTELHTL
GDTQLDSRPEIKDKYYYSLFDMTVRGSCSCYGHASRCLPVPGYDTYPNMVHGMCECTHNT
KGLNCEMCEEFYNDLPWQPARKNQPNACKKCNCNNHAAKCHFDPAVFEATGEVSGGICDN
CQHNTQGRNCQECKPFFFQDPNRDIRDPEICQPCDCDPAGSERNGECESHTDEVLGLEGG
RCRCKRHVRGSRCDQCVENYWNLQGDNPLGCDACSCNPLGTLGDYGCDQHTGLCLCKRYV
TGQNCDTCHRGFYGLSDGPYGCEACNCDIGGSLSESCDQQSGQCTCRPHIMGKHCKQVEP
GYFFAGLDYYIYEAEFGRGTGNARVYIREPIPGGPSYWTGPGYMRVMEGDSIEFTVTDIS
FPTYYDIVLRYDPRMPEMWEDVRVTVVRPDQVDPDGLCADFNPQEDIKSVTIEPGARYQL
VTPPSCLESGKMYTIRLDFQRYKQGQLTPDATMFIDSLILVPHTDAIPIYQIPGLHEYMK
NDFLRNRCRQLQFNSIQADMPDVCKGHIFSISAVLHNGAIDCDCDPTGSVSRECNPEGGR
CPCKPNVVGRRCDQCAPGTYGFGPNGCTACNCHNIGARDNFCNEQTGQCTCIQNAYGRAC
DSCRVGFWGFPQCRQCQCNGNADTCDNLDGRCIACKNFTDGQYCDRCMNGYYGDPRVGVR
IPCRPCLCPGGPGSENQHADTCTLDPRSSSVTCDCYPGYERPTCDRCSENYFGNPLSPGG
SCEQCMCNNNIDPDVAGSCDRESGECLKCLFNTEGFSCEHCTPGYYGDATTQDCKSCVCF
SLGTDADGGQCDRRNGQCPCLPNVMGLRCDQCAPGHYNLQSGKGCDACNCDPQGSLSTEC
TQLEGQCECRAGRGGQTCGDCEDFFWGDPLDQCFPCDCDPQGSTSMQCDRRTGQCVCEQG
VTGYKCDRCARGTTGDLPNCVPCGECFDNWDRIIRDLRDQTHSLVETGNNISVTGAIKAF
DDEFKHMQNNIDEIRRILSTANVTRVDVQDIQNMLDTIRRNLTESNKALNNVDRELSNTT
ARVQSGNNQIAILQRRVEDLKNLAEELRGNATDIQARDVEGAFNITREAERRSREAQRKV
DETQRTVVDSKRTRQQVDALIDQRRDDFNNRLKENKASLDELDGKVSTLGGRLSNLNEQV
CGSQAAPCDTLCGGGGCGRCGGASCGAGAVTKANKALRYAQQAADILDSKQTEAYSKVTN
LESAKQDAEQAKADAKMAYDQALLAKNQSESAREDLEDLLHRVRQFFLEEAATPESIEKV
AQEVLAMSISLTPAQIEELADKINRTIQGLQNIDSILDDTRDDLAKAKRLKQRADDASGD
ASAIQKTAEDVLSALDGAKKAQEEAEREIITADKNIQDANQDLAMIESETTSAADTSNRS
MTILDRLKARLSDLRKKYNQNKFEVEEAEKASREATDLANQAERDANDLDNKYQSAAGRL
NNKFNMTSDANERATRLKKRADELAAGTQEKYQNLKRMQQDFEDNNKTLNELSDMIDELN
RRMQEYLDKIQEKSKYYRNC
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggagttttctctcttctacgtcacactatgttgtatagttttaaaagatgttgtgggt
cagtcccaacgacagcgtcattgcgaacaaggcagctgttacccagcaacaggagacctt
ctgattggtcgaggaaagcagctaagagcaacgtccacatgcgggatggtcaaaccggat
agatactgtgttgtgtcatatctagaaaagcggacaaagtgctttcagtgcgactctcgt
gagccatggcagtcgagagtacacgaaaacagccaccgtatcgagaacattgtctcatca
ttcaaagataggcgagatcggtggtggcaggcggaaaatggtgttgagaatgtttcaatt
cagttggatcttgaagcagagtttcattttacacacttgattatgacatttaaaacattc
aggccaaagtccatgtttatagaaaggtcatatgattttggtaaaacttggaaagtgtat
cgttattttgctcagagctgtcgcaaatccttccctggaattccaagaggaccagtgcgg
tcgatgactgatgttatttgtcagactaaatactcagcagaaacaccatcaactcaggga
gaggtaattttccgtgtgttgccaccattcattcccatcaaggacccgtacagcgaacag
gtgcaggatctgctcaaactcaccaacttgagagtcaacttcactgaactccacacatta
ggtgacacccagcttgacagccgtccggagatcaaggataagtactattactctttgttt
gacatgactgtcagaggtagctgctcgtgttatggccacgcctccagatgtctgccagtg
ccaggatatgacacatacccaaacatggtgcatggcatgtgcgagtgtactcacaacacc
aagggcctcaactgtgagatgtgtgaggagttctacaatgatctcccatggcaaccagct
aggaagaaccagccaaatgcttgcaagaaatgcaactgcaacaatcatgctgccaagtgt
cactttgatccagcggtgtttgaggctactggcgaagtgagtggcggcatctgtgacaac
tgccaacacaacacacagggccgcaattgtcaggagtgcaaacccttcttcttccaggac
ccaaacagagacatcagggacccagagatatgtcagccatgtgactgtgaccctgccggc
tcggagcggaatggcgagtgtgaaagtcatacagatgaggtgcttggcctggaggggggt
cgatgtcggtgcaaacgccatgtgcgagggtccagatgtgaccagtgtgtagagaactac
tggaatctgcagggagacaacccactgggctgtgacgcctgctcgtgtaatcctctgggt
acactaggagactatggttgtgaccagcacactggcctctgtctgtgtaagagatacgta
accggacagaactgtgacacttgccatcgcggcttctatggtctgagtgatggcccttat
ggatgtgaagcttgcaactgtgacatcggtggctcgctcagcgagtcatgtgaccagcag
tcgggacagtgcacctgtcggccgcacatcatgggcaaacactgcaagcaggtggagcca
ggctacttcttcgctggcttggattattacatctacgaggcagagtttggccgcggcacc
gggaatgccagagtgtacatccgtgagccaatccctggtggtccatcgtactggaccggc
cctggttacatgagagtgatggagggagacagcatcgagttcaccgtcactgacatcagc
ttccccacctactacgacatcgtcctcagatacgacccaaggatgccggagatgtgggag
gatgtccgggtgacagtggtacgcccagatcaggtggatccagatggtctgtgtgctgac
ttcaaccctcaggaggacatcaaatctgtcaccattgaaccaggtgcacgctaccagctg
gtgacccctccatcctgcctggagagcggcaagatgtacaccatccgactggacttccag
cgttacaagcaaggccaactgacgcccgatgccaccatgttcattgactctttgatcctg
gttccccacacggatgccatccccatctaccagatccccgggctccacgagtacatgaag
aacgacttcctgcgcaaccgatgtcgtcagctgcagttcaactccatccaggcagacatg
cccgatgtctgcaagggccacatcttcagcatctctgctgtgcttcataatggagccatc
gactgcgactgtgaccccaccggctccgtaagtcgtgagtgtaaccccgagggaggtcgg
tgcccctgcaagcccaacgtggtcggcaggagatgtgaccagtgtgctcccggaacgtat
ggattcgggcccaacggctgtacagcttgcaactgccacaacatcggtgcccgggacaac
ttctgtaatgagcagaccgggcagtgtacgtgtatccagaacgcctacggacgtgcctgc
gacagttgccgcgtggggttctggggcttcccccagtgtcgacagtgtcagtgcaacggc
aacgccgacacctgtgacaaccttgacggacgctgtattgcatgcaagaacttcaccgat
ggacagtactgtgataggtgtatgaatggttactatggcgacccccgtgttggtgtgcgt
attccctgccgcccctgtctctgccccggtggaccaggttctgagaaccagcacgccgac
acctgcactcttgatccaaggagcagctctgtaacatgtgactgttacccaggatacgaa
agacccacgtgtgaccggtgttccgagaactattttggcaacccgctgtcccctggtggc
agttgtgagcagtgcatgtgcaacaacaacattgaccccgacgtcgcgggcagctgtgac
cgcgagagtggcgagtgcctcaagtgtctgttcaatactgagggcttcagctgtgaacac
tgtacacctggctactatggcgatgccacgactcaggactgcaagagttgcgtctgcttc
tcactgggtacagacgctgatggtggtcagtgtgaccgtcgcaatggtcagtgcccctgt
ctgcccaacgtgatgggtctccgatgtgaccagtgtgccccgggccactacaacctgcag
agtgggaagggatgtgatgcctgcaactgtgacccccagggatctctctccactgagtgc
actcagctggaaggccagtgtgagtgtcgagccgggcgagggggacagacttgtggtgac
tgtgaggacttcttctggggagatcccctcgaccagtgcttcccatgtgactgcgacccc
cagggatctacgtccatgcagtgtgaccgccgcaccggtcagtgtgtgtgcgaacagggt
gtcacaggctacaagtgcgaccgatgtgcccgtggaacaaccggagatctgcccaactgt
gtgccatgtggcgagtgcttcgacaactgggatagaatcatccgtgacctcagagaccag
actcacagcttggtggagacaggtaacaatatctcagtaacgggagccatcaaggcattt
gatgatgaattcaagcacatgcagaacaacattgacgagatccgtcgcatcctgtcaaca
gccaacgtcacacgagtggacgtgcaggacatccagaacatgttggacacaatcaggcgt
aacttgaccgagagcaacaaggccctgaacaatgtcgacagggagctgagtaacacgaca
gctcgtgtacagagcgggaacaaccagatcgctatcttgcagcgccgcgtggaggacttg
aagaacctggctgaggagttgagaggaaacgccacagacattcaggcccgagatgtggag
ggtgccttcaacatcactcgtgaggctgagcgtcgttctcgtgaagcccagcggaaggtt
gatgaaacacagagaaccgttgtggattcaaagaggaccaggcaacaggtggatgccctc
attgaccagagaagagatgacttcaacaaccgcctcaaagaaaacaaggcttcactggat
gagctggatggcaaggtgtcaacattgggaggcaggctttctaatcttaatgagcaggtg
tgtggcagtcaagcagctccctgtgacactctgtgtgggggtggcggctgtgggcgttgt
ggaggagccagctgtggagcaggtgcagtcaccaaggccaacaaggctctgcggtatgcc
cagcaagctgccgacatcttggactcgaagcaaacagaagcatacagtaaagtgaccaat
ctggagtctgccaagcaggatgcggagcaagctaaggcggacgccaagatggcgtatgac
caggccctgcttgccaagaaccaatcagaatcagccagggaagacctcgaggaccttctc
cacagggtccgacagttcttccttgaggaggctgcgacaccagagagcattgagaaggtg
gcgcaggaggtgctggctatgagcatatctctgactccggctcagatcgaggagctggca
gataagatcaacagaaccatccaaggtttacaaaacatcgactctatcctggatgacaca
agggatgatttggcgaaggccaagagactcaagcagagagcggacgatgcatcaggggat
gcttcggctatccagaaaacagccgaggatgttctcagtgccctggatggagctaagaag
gcccaggaagaagctgagagggagatcatcacagctgacaagaacatccaagatgctaat
caggatctggccatgattgagtcggaaaccacttcagcagcagatacgtccaacaggagt
atgactatcttggacaggctgaaggcacgtctgagtgatctccgcaagaaatacaaccag
aacaaatttgaagtagaagaagcagagaaagcgtccagagaagccacggatcttgccaac
caggcagagagggatgcaaatgaccttgataacaaatatcaaagtgcagctggtcggttg
aacaacaagttcaatatgacgtctgatgcaaacgagcgtgcaacacgactgaagaagcga
gcagatgaactagctgccggcacacaggagaaatatcagaacttgaagcgaatgcagcaa
gattttgaggacaataacaagacactgaacgagctgtcagacatgattgacgagctgaat
agacgcatgcaggagtacctggacaaaatacaagagaaatcaaaatattatcgtaactgt
taa
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integrated database retrieval system
