Haliotis cracherodii (black abalone): 139445059
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Entry
139445059 CDS
T10814
Name
(RefSeq) uncharacterized protein
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcra03041
]
139445059
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139445059
Spliceosome [BR:
hcra03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
139445059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
139445059
NCBI-ProteinID:
XP_071082236
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MNIAHKINEKTRTGDVLISEEVDFSSLLLSKPVIQGLLNSGFERPSPIQLKAIPLGRCGL
DLIVQAKSGTGKTCVFSVIALEAIQVQSSAIQVLVLAPTREIAIQIWDVIKNIGSAMSAL
RCHTFIGGLPLSEDKQNLKKCQIAVGTPGRIKQLIETNLMNTENVRLFVLDEADKLLEDS
FQEQINWIYSALPDNKQMLALSATYPESLAQHLTRYMRNPTFMRLNISDPALLGIRQYYK
RVAFSPMANLAFEAKTKAVIEILSGVSFQQCLIFSNLQTRAQNLSDELQRQGWPTACIAG
SHEQKDRIEAMAKLKTYKCRVLISTDLTARGIDADKVNLVINLDVPRDHETYLHRIGRAG
RFGSYGAAVTVVSEGQEQLGLSAVERKCNTHINSLPDPLPRDLLRVTVQINLDDMVTTEQ
LITRPDCGNRSHDLPATSDKSRDKDRKLEDTKHEKQNTYIDAEDVSLVNGCAGGGRDDVD
EETGSENICTQSSTNGIISDKQSSNTSERLPENIGKGALILPERSSQIKQPKSEYLSQDP
ESSTVEPGMVPMLQPAKCLMDENKRDMNSVDSRGGHSENNKPVLDNSGQTVSGCDVNQTL
DHTLLTDSGKNMSDGRKIKTAKKGRKRKANSDSIKESQSDPSSYEEKSVTMVTQINGQTQ
SSSTGSAVATSIKALLATRQRICSGAMGQVELTVPSYRESLGRKKLMNPHTYSSALVDYE
MFLEQGDNGKSVPNIPGLVLRKIDHEKKDSTPDADFVRSVADCVDRMYDCALSQIPLRGD
NHDMTNESVGDATAELSVMPVSRGQMCSKTTQTTAAAQKFNQRPKSVRYDPMSVSSLAMV
DLDLAIRENKENFPQNVSINKASPLQCVEGLERDASFPVPTADGELANHKGHVGEKHSKE
DEHVLVEKVKPYKVKVGSVSVNENSVVRKAKVDDVSNVAMLRNGCELMYVSDGVGKISMA
ADAVTVEEELMRDCRPRSRKGKMMAGLDGLEYGRKCGRHLPDQLYGTGGDVVSQGDTDSS
DSDSSSSSSEYDREVFRNNYVDDPVFTTRRQSDDTYERRNRDRHSDHYSSGYDNEADYLP
YDNQYVFDEQDTTNVEYSDRVWGNDNDFQPNMSSYPYDVWSQPWGNPWGYLHPHPYWHPP
PYYAPPQYYPSPYLYPPAYCPAPPHAMWYGGGGGYGRVGLTDDERIDAMRKNMEYQRAYI
KKMAKIKY
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgcccataagataaacgagaaaacccgaacgggagatgtattgatttccgag
gaggtggatttttcttcgctcctgctatcaaagcctgtgattcaaggcctcctgaactct
gggtttgaacggccgtcaccaatacaactaaaagctatcccgctaggccggtgtggacta
gatttgatagttcaagcaaagtcaggaactggaaaaacatgtgtcttttctgtcatagct
ctcgaagcaatacaagtgcaaagctctgctattcaagtattagtcctcgctccaacaaga
gaaattgctatacagatctgggatgtgataaaaaatattggcagtgccatgtcagcactg
cgatgtcacaccttcattggtggtcttccacttagtgaagataaacaaaatttgaagaaa
tgtcaaattgccgtaggaacacctggtcgcattaagcagctgatcgagacaaacttgatg
aatactgagaacgttcgactatttgtgctagacgaggcagataaacttctagaagatagt
ttccaggaacaaatcaactggatctattcagcactacctgacaacaaacagatgttggct
ttgtcagccacttacccagaatcccttgcccagcatctgacacgctacatgcggaatcca
acgttcatgagactcaacatctcagatcctgcacttctgggtatccgtcagtactacaag
agagtggcgttcagccccatggccaacctggcatttgaggccaagacgaaggctgtcatt
gagattctgtcaggcgtcagcttccagcagtgtctcatcttctccaatctacagaccaga
gctcagaacctgtctgatgaactgcagaggcaggggtggccaacagcctgtatagccggc
agccacgagcagaaggacagaatagaggccatggccaaactgaagacttacaagtgtcgt
gttctcatctccacagatctgacagcccgaggtattgatgcagataaggtcaacctagtc
atcaaccttgacgtcccacgggaccatgaaacctaccttcatcgcatcgggagagcaggg
agatttggatcgtacggtgctgctgtgacagtggtcagtgaaggacaggaacagctgggt
ctgtctgcagtggagaggaagtgcaacacccacatcaacagcctgccagatcctcttcct
agggacctgctgagagtgactgtccagatcaaccttgatgacatggtcacaacagagcaa
ctaatcacaaggccggactgcgggaataggtcacatgacctccctgcgaccagtgataaa
agtcgtgacaaggaccgaaagctggaggatacaaaacacgagaagcagaatacttatatt
gatgcagaggatgtgagtttagtcaatggatgtgctggaggaggccgagatgatgttgat
gaagagacagggagtgagaatatatgtacacaatcttccacaaatgggatcatttctgac
aaacagtcttcaaatacttcagaaagattaccagagaatattggcaaaggtgccttgata
cttccagaaagatcttcacaaataaaacagccgaagtctgagtacttgtcacaagaccct
gaaagtagtactgttgaaccaggtatggtccctatgttacagccagcaaaatgtctgatg
gacgaaaataaacgagacatgaatagtgtggacagcagaggtggtcactctgaaaacaac
aaacctgttttggacaacagtggacagaccgtgagtggttgtgatgttaatcaaactttg
gaccacaccttgttgactgattctggaaaaaatatgtcagatggaagaaagataaagaca
gctaagaaaggtcgaaagaggaaagctaatagcgactcgatcaaggaatctcagtcagat
ccttcttcgtatgaagagaaaagtgttaccatggttacacaaataaatggacaaacacaa
agcagctctactggcagtgctgttgcaacaagtattaaagcattactagcaaccaggcag
agaatctgctcgggcgccatgggtcaggttgagttaacggttccaagctacagggaatca
ctgggcaggaagaagctgatgaatccacacacttacagcagtgctcttgttgactatgag
atgttcttggaacaaggtgacaatggtaaaagtgtgccgaatattcctgggcttgttttg
aggaagattgaccatgaaaagaaggattcaaccccggacgcagactttgtgaggagtgtc
gcagattgtgttgacaggatgtacgattgtgctctttcccagataccgttaaggggagac
aatcatgacatgacaaatgaaagtgttggcgatgctacagcagagctctctgtgatgccg
gtgtctagaggtcagatgtgtagcaaaacgacacaaacaacagcagctgctcaaaagttc
aaccagagacccaagtctgtccggtacgatcccatgtctgtgtcatctctcgccatggtt
gaccttgaccttgccatcagggaaaacaaagagaatttcccccaaaatgtctccattaac
aaagcaagtcccttacagtgtgttgaagggttggagagagatgcaagctttccagttcca
actgcagatggggaactagcaaaccataaaggtcatgttggggagaaacattccaaagag
gatgaacatgttttggtagaaaaggttaagccgtataaggtcaaggtcggtagtgtgtca
gtgaatgagaacagtgttgtacgtaaggctaaagtagatgatgtctcaaatgtagcaatg
ctaaggaatggctgtgagttgatgtatgtgtcggacggagtggggaagatcagcatggct
gcggatgctgtgacagttgaggaggagctgatgagggactgcagaccaaggtcgaggaaa
gggaagatgatggccggcctggatggtctcgagtacggcaggaagtgtgggcgtcatctc
cctgaccagctctacgggacaggaggggatgttgtcagtcagggagacacggacagctcc
gactcggactcgtccagctcaagttccgagtatgaccgagaagtgttcaggaataactat
gttgatgacccagtgttcaccacaagaaggcagtctgatgatacatacgagagaagaaac
agggacagacattccgatcattactcctcaggatatgataacgaagctgattacttgccc
tacgacaatcagtacgtgtttgacgaacaggacactacgaatgtggaatacagtgaccgg
gtgtggggcaatgataatgatttccaacccaacatgtccagttatccatacgatgtttgg
tctcagccatgggggaacccgtgggggtacctccacccccatccctattggcacccccct
ccgtattacgctccccctcagtactatcccagtccctacctgtacccacctgcctactgc
cctgccccccctcatgccatgtggtatgggggtggaggaggttatggaagggtaggactg
acagatgacgaaagaattgatgctatgagaaaaaatatggagtatcagagagcatatatt
aagaaaatggcaaaaatcaagtattag
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integrated database retrieval system
