Haliotis cracherodii (black abalone): 139446765
Help
Entry
139446765 CDS
T10814
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03013
Nucleocytoplasmic transport
hcra03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139446765
mRNA cycle factors
P-body specific factors
139446765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139446765
NCBI-ProteinID:
XP_071084188
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MDSNESKQDEGSKSTKGNGSGKDGPSKREDGGSKAGRDSKDAGKDVSDMRRDDYPSKTSS
RDGGKDRGRMGNGDRRKEPPPHKSVRKGAGDGPGDYRDSRDRYDDYYDRRSSGQGRPPPD
RGDRRQDSRKGSSFVGKPDKLDKKPSTSNNGTKTKDVKTPAKIEQDRKAQKEKEEEEKKK
KEEEKKKNEEEKKRKEEEEKQLAEQRRLEEEERKLKEEEERKRLEEERAKQQLEDEKKML
QDYIEETREKLTARVALREKNIAAVENRPDESFFGKLDSSLKKNTAFVKRLRNMTESQFE
GFIKDFGSLNLTKYIGEAASALAEVKLKMSDVQSAVQLCSLMHQRYAEFTPALLENFQKY
LLNKKDEKISNLSKYRVDLRFFAELISVGVFSLKEGLPVLANQLSILVNNDKDEHNNLSI
ISSFCKHCGDDYVGIMPRKIRLLSEKHHGAGIMKSKLLPPERQKACRNLLKDYSSSLMKH
LIKDHKELKGMERQNRRILQTKGELSNERRDAYENALTTYQKLHTSAAVLADLLDEDLPD
LPDEDLKQDESGGMFDFFSPMKGAECQYEGDCTLFEDEDTRTFYESLPDLRSFIPGILYK
DSEQSSSKDANKEPDPVLEEVDLECLEVEDLEVELEEKLEEKLAVDGSSSEVEDKDSSVR
EETAEDTAEDRSFIPPEADEDDGETGTLMKTQFEAYLQSLPNCVNRDLIDKAAIEFCMNF
NTKSNRRKLVRGLFTVHRTRYDLLPFYARLVAILNPCMPDVATDLVQYLKGDFKWHIKKK
DQINIESKLKTVRFLGELVKFKMCPKVEVLHCLKMLMFDFSHHNIEMACALLESCGRFLY
RSMDSHHRTKAYLDVMMRKKAALHLDSRYTTMIENAYFYSNPPEYQQVARIERPPMHEYI
RKLLYKDLSKITTEKVLRQMRKLDWDDVAIAFYTTKCLTAVWNIRYNSVHCAANLLAGLA
PYHEHVAIQVVDGVLEDIRLGMEVNHPKYNQRRVSCVKYLGELYNYRMVESAVIFKTLYS
FITFGISLDENPTPLDPPEHLFRVRLVCTLLETCGQYFDKGSSKKKLDCFLVYFQRYYWF
KMKNPIWTVHRPFPQDVKNLVKDTLEMIRPKLKIYVSWEEAIKAAEDIENEYKTKIANLL
PIIETGDESEVSEEEGLTPIQETDEEIDELSQSLSQSQLEDGTESSQDDQSGQSRSQTGS
QARDGEDESEDSDRDEFLESAGEDETEDQITLVTGAPKRIVCQEDDDFMTAFDKMMSENI
QARAQESLKVPQLDIAMPVHLRSKTKKTVPGTGTGVTQPIPEVDTAINFVLMTRKGNKAQ
FTNLNVPISAEFAAKFKEREQAEKMEKEKMKQVVLGIQQRQEEEDYQEMMASLNRPVPVN
TNRERRIRYSHPKGAPDADLIFGSKKR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaatgaaagcaaacaagatgaaggatcaaaaagtaccaaaggtaatggaagt
gggaaagatggcccaagtaaacgagaggatggtggctccaaagcaggacgtgacagtaaa
gatgcagggaaggatgtgagtgacatgagacgagatgattatccctcaaaaactagcagc
agagatggaggaaaagatagagggaggatgggaaatggtgatcgaaggaaggaacctcct
ccccacaaatctgtgaggaagggggcaggggatggacctggagactacagagatagtcgt
gacaggtatgatgactactatgatcgcagaagttctggccaaggcagaccaccaccagat
cggggtgaccgtaggcaagattcaagaaaaggcagcagctttgtgggaaaacctgataaa
ctagataaaaaaccaagtacctcaaacaatggaactaaaacaaaggatgttaaaactcca
gctaagattgaacaggacagaaaagcacaaaaagagaaagaagaagaggaaaaaaagaaa
aaagaagaagaaaaaaagaagaatgaagaagaaaaaaagagaaaagaagaagaggaaaaa
cagctagctgaacagaggaggttggaggaagaagagaggaaactcaaggaagaagaagag
agaaagagacttgaagaggaaagagcaaaacagcagttggaggatgaaaagaaaatgtta
caagactacatagaagaaaccagggagaaactgacagcaagagtagctctgagagagaag
aatattgctgcagttgaaaatagacctgatgagtcattctttggaaaactggattcaagc
ttgaaaaaaaatacagcatttgtgaaaagactgaggaacatgacagaatcacaatttgaa
ggcttcataaaggattttggaagtctgaacctaacaaagtacataggagaagctgcatct
gcccttgctgaggtgaaactgaagatgtctgacgttcagtcagcagtgcagctgtgcagc
ctgatgcaccagagatatgctgagtttactcctgcactgctggagaactttcagaagtat
ctgctcaacaagaaggatgagaagatttcaaatctaagcaagtatcgggtggatctccgg
ttctttgcggaactgatatctgtgggagtgttctcactgaaggaaggcctgccagtgttg
gccaatcaactgtcaatacttgtgaacaacgacaaagatgagcacaacaacctctctatc
atctccagcttctgtaaacactgtggggatgactatgttggtatcatgcccaggaagatc
aggctgctttccgagaagcatcatggagcaggtatcatgaaaagcaagttgctgccccct
gaacgccagaaggcttgcaggaacttgctgaaagactactccagttccctgatgaaacac
cttatcaaagatcacaaggagctgaagggcatggaaagacaaaaccgaagaatcctacag
accaaaggtgaactgagcaatgagagacgtgatgcatatgagaatgcgttgactacatac
cagaagcttcacacaagtgcagcagttctagctgatctactagatgaagatttacctgac
ctaccagatgaagaccttaaacaagacgaaagcggaggaatgtttgactttttcagtcca
atgaaaggagctgagtgtcagtatgagggagactgcactttgtttgaagatgaagacaca
agaacattctatgaatctctccctgatttgaggtcattcattccagggattttgtacaag
gacagtgagcagtcttcaagtaaagatgcaaacaaggaacctgatccagtgctagaagaa
gttgacctggagtgcctagaggtggaggacctggaggtagagctggaggagaagctggag
gagaaactggcggttgatggtagcagcagtgaggttgaagacaaggacagcagtgtcagg
gaggagacagcagaggacacggcagaggacaggtccttcataccacctgaagctgatgaa
gatgatggtgaaacaggaactttgatgaagacacagttcgaagcatacttgcagtcatta
cccaactgtgtaaacagagatctcatcgacaaggctgcaattgaattttgcatgaacttc
aacaccaaatccaatcgaaggaaacttgttcgaggattgtttactgtacatcggacaagg
tatgacctgttgcccttctatgcccgcttggtggccattctgaacccctgtatgccggat
gtggccactgatctagtgcagtaccttaagggagacttcaagtggcatattaaaaagaaa
gaccagatcaatattgaatctaaactaaaaactgtcagattcttaggagaacttgtgaag
ttcaagatgtgtcccaaagtagaggtcttgcactgcctgaagatgttgatgtttgacttt
tcccaccataatattgagatggcctgtgctcttctggagtcatgtggcagattcctgtac
agatctatggactcgcatcacaggacgaaagcatatttggatgtaatgatgaggaagaag
gctgctcttcacctagacagtcggtacacaactatgatagagaacgcctacttctacagc
aaccctcccgagtaccagcaggtggctcgtatcgagagacctcccatgcatgagtacata
cgcaagctgctctacaaagacctatctaaaatcactactgagaaggtgctgagacagatg
aggaagttagactgggacgatgtagctattgccttctacacaaccaagtgtctgacagca
gtgtggaacatccgctacaactctgttcactgtgctgcaaatctgctggctggacttgca
ccatatcatgagcatgttgctattcaggttgtagatggagtattggaggatatcaggcta
ggaatggaggtgaaccacccaaagtacaaccagaggcgagttagctgtgtcaagtacctg
ggagagctgtacaactatcgcatggtggagtcagccgtcatcttcaaaacactctactct
ttcattacatttggcatcagcttggatgaaaatcctacccccttggatcctcctgagcac
ttgttccgagtgagattggtgtgtacactccttgagacatgtggtcagtacttcgacaag
ggatccagcaagaagaaacttgactgcttcctcgtatacttccagagatactactggttc
aagatgaagaaccctatctggacagtgcatcgtccattccctcaagatgtgaagaattta
gtgaaggacactctggagatgatccgacccaagctgaagatttatgtcagttgggaggag
gctatcaaagctgccgaggatattgaaaatgaatacaagacaaagattgctaacctgttg
ccaatcatcgagactggtgatgagagtgaggtgtcagaggaagaaggactgaccccaata
caagagactgatgaggaaattgatgaactaagccagagcttgtctcagtcgcaactagag
gatggcacagagtccagccaggatgaccagagtggtcaaagtcgcagccagactggaagt
caggcaagagatggcgaggatgagagtgaggacagtgatagagatgagttcctcgagtct
gctggagaggatgagaccgaagaccagataactttggtgactggtgctcctaaacgcatt
gtatgtcaagaagatgatgacttcatgactgcctttgacaaaatgatgtctgaaaatatt
caggctcgagcccaggaatctctgaaggttccccagcttgacattgctatgcctgttcac
ctgcgcagcaagactaagaagacagttcctggcacaggcacaggtgttacacaacctatt
cctgaagtggatacagccattaactttgtgttgatgacaaggaaaggcaacaaagcacag
ttcacaaatctgaatgtaccaatatctgctgagtttgctgccaaattcaaggaaagagaa
caggcagagaagatggagaaggaaaagatgaagcaggttgtgttgggcatacagcagagg
caggaggaggaggactatcaggaaatgatggcctccctcaacagaccagtgcctgtaaac
acaaatcgtgagcgtcgtatccgatactctcatcctaagggagcccctgatgcagatctt
atctttggctctaaaaaacgctga
DBGET
integrated database retrieval system
