KEGG   Haliotis cracherodii (black abalone): 139446827
Entry
139446827         CDS       T10814                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
hcra  Haliotis cracherodii (black abalone)
Pathway
hcra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hcra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    139446827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcra03019]
    139446827
   03036 Chromosome and associated proteins [BR:hcra03036]
    139446827
Messenger RNA biogenesis [BR:hcra03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     139446827
Chromosome and associated proteins [BR:hcra03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     139446827
    COMPASS/SET1 complex (yeast)
     139446827
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_SPT8 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 PQQ_3 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd eIF2A Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_Nup120_160 WD_LRWD1 MIOS_WD40 Beta-prop_DCAF4 Kelch_6
Other DBs
NCBI-GeneID: 139446827
NCBI-ProteinID: XP_071084266
LinkDB
Position
Unknown
AA seq 313 aa
MKLSDRTVIDFKVAKIFRENTDRINSVDFATNGETIITSSDDDSIVIYDCLNGTPKRTLN
SKKYGVDLIRYTHAVNTALHCSTKIDDTIRYLSLHDNKYIRYFPGHTKKVVTLNMSPIDD
TFLSGSMDKTIRLWDLRSQNCQGLMHLSGRPVAAFDPEGLIFAAGINSESVKLYDLRSFD
KGPFTTFRLPQDKDCDWTQLKFSPDGKLILISTNGSVLRLIDAFQGAPLQIYAGITNQKG
VPLEASFSPDSRYVFCGSTDGKIHCWSTETGKKIAELLGDHPGPIQHVQFNPKYMMFATA
CTNMAFWLPVTDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctctctgatcgtacagtcattgatttcaaagtagcaaagatattcagagagaat
acggatagaataaatagtgtagatttcgctactaatggcgaaacaataataacaagcagt
gacgatgattctattgtcatatatgattgcttaaacggaacacctaaaaggaccttgaac
agcaaaaaatatggagtggacttgatacgctatacccatgcagtcaatacagccttgcac
tgttcaaccaaaatcgatgataccatacggtatttatcgttacatgacaacaaatacatc
aggtattttccggggcacacaaaaaaagttgtgacattaaacatgtcccccatagacgac
acttttttgtctgggtccatggacaagacaatccgtctgtgggatctgcgatcgcaaaat
tgtcagggactgatgcatttatctgggcgacctgtggcagcatttgacccagaaggatta
attttcgcagctggaattaattcagaaagtgtgaagttgtatgatcttcgctcatttgac
aagggcccattcacaaccttcaggctgccacaagacaaggactgtgattggacacagctc
aaatttagccctgatgggaagcttattctcatctcaacgaacggatctgtactccgctta
attgatgcatttcagggggcacctcttcaaatatatgcagggatcaccaaccaaaagggg
gtgcctttagaggcatccttcagtccagactcgcgctacgtcttctgtggttcaacggat
ggcaagatacattgttggagcacagagacagggaagaagatagccgagctactgggggat
catccgggacccatccaacatgtacagttcaaccccaaatacatgatgtttgccacagct
tgtacaaatatggcattctggttaccagtaactgacgactga

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