Haliotis cracherodii (black abalone): 139449512
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Entry
139449512 CDS
T10814
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139449512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139449512
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139449512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Ish1
Motif
Other DBs
NCBI-GeneID:
139449512
NCBI-ProteinID:
XP_071087037
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MSLFSNPTQAFGTNPATTATTGFSFGGAATTTAPAFGGFGGTATTSAPTGFSGFGTGTQA
TVGQGTGFFGGAPTATTTATAPGFSGFGTNPGTSTTGFSGFGGAVPTTTTASGFTGFGGF
GTTSGFGAGTGTTTGFGAPAGATGTSTGFGAFGTTGFGGAATGQTGFGGGLFAGGQQPQQ
QQGASDLTNMAMAVSLPQIYGDERDAMIAKWNQLQACWGTGKGFYSQNGVVEFKADNPFC
RFKAIGYHVIPSGRNEDGLVALMLKKKQTDVAAAQQQIVDTLHKMFGSKPTLSVCVEGIR
PLPEDRTELVIYVLERPQTGPARRVGASDLFTFMNQAGTKNTLVTQLTVENIVPKMGWSS
EQLKEYLDKPPAGIDPVLWQQAKLDNPDPTRLIPVPMIGFKEVQRRLQHQQEQTRLHQQR
LDVMSGDLTDLQNKHSNMLARQEEYKRKHLELGHRLLQVIVKQEIYRKMGYAIQAEEEHL
KVQLEVLQTELNHPTQFKGRLNELMSQIRMQNHVSSQRQEVSFQMDTELQSEIKQLLKQQ
QDGLNHLIQILKDDASDLHLIESSLADTQTRR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttttccaatcctacacaagcatttggtactaaccccgctacaactgctacc
acggggttttcatttggtggtgccgcgacgacaacggcgccagcatttggtggattcggc
ggcaccgccacaacatcagcaccaacaggcttttcaggtttcgggacgggaacccaggcg
acggtggggcaaggcacaggttttttcggaggtgctcccacggcaacgactacagcaaca
gcaccaggtttcagtggcttcggtactaaccctggcacatccactacaggtttctcagga
tttggaggagcggtgccaacaacaacgactgcctcaggttttacaggatttggtggattt
ggtaccacatcaggctttggtgctggaacgggaaccacaactggctttggagcaccagca
ggagccacaggaacttcaacaggatttggggcatttggcactacaggatttggtggtgca
gcaacaggacaaactggcttcggagggggattgtttgcaggaggccagcaacctcagcag
cagcagggtgcctctgacctcaccaacatggccatggctgtgtcgctgccgcagatctat
ggtgacgagagagatgccatgatagccaagtggaaccagctccaggcatgctgggggact
gggaagggcttctacagtcagaatggcgtggtggagtttaaggcagataaccccttctgc
agattcaaggcgattgggtaccatgtgataccaagtgggaggaacgaggatggattggtg
gcgctcatgttgaagaagaagcagaccgatgtggcagcagcgcagcagcaaatcgttgac
acactacacaagatgttcggcagtaaacccactctctcggtctgtgttgagggcatccga
cctctcccagaggacaggacagagttggtgatctatgtgctggagcgtccacagacaggc
cctgctagacgggttggagcgtcggatctgtttacattcatgaaccaggcaggcactaag
aacacgctggtcacccagctgactgtggagaacattgtgccaaagatgggctggtccagt
gaacagctgaaggagtacctagataaacccccagctggtatcgaccctgttctgtggcag
caggccaagctggacaacccagatcccaccagactgatcccagtcccaatgatcggcttc
aaagaggttcagcggcgactacagcaccagcaggaacagacacgactacatcaacaacgt
ctcgatgtgatgtctggtgatctgacggacctgcagaacaagcacagcaacatgctggca
agacaggaggagtacaagaggaaacacctggagctgggccaccgactgttgcaggtgatt
gtgaagcaggagatctaccggaagatggggtacgccatacaggcggaagaagagcatctc
aaggtgcagctggaggttctgcagactgagctcaatcaccccacacagtttaagggtcga
ctcaatgagctgatgtcacagatcaggatgcagaaccatgtttcatctcagagacaggag
gtgtcatttcagatggacacagaactacagtcagagataaaacagctcctgaaacaacaa
caagatggtctcaatcatctgatccaaatcttgaaggacgatgcctccgaccttcacctt
atagaatcgtccttagcagatacacagacacgaagatga
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