Haliotis cracherodii (black abalone): 139449516
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Entry
139449516 CDS
T10814
Name
(RefSeq) DNA-binding protein SMUBP-2-like isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcra03009
]
139449516
03012 Translation factors [BR:
hcra03012
]
139449516
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139449516
5.6.2.5 RNA 5'-3' helicase
139449516
Ribosome biogenesis [BR:
hcra03009
]
Eukaryotic type
Other ribosome biogenesis factors
139449516
Translation factors [BR:
hcra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139449516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
R3H
Viral_helicase1
ResIII
zf-AN1
Helicase_RecD
AAA_22
nSTAND3
DEAD
AAA_16
SLFN-g3_helicase
IstB_IS21
Flavi_DEAD
AAA_25
UvrD-helicase
AAA
ABC_tran
ATPase
PhoH
Glyco_tranf_2_3
NTPase_1
Zot
Znf_XAF1_N
UvrD_C_2
MeaB
Motif
Other DBs
NCBI-GeneID:
139449516
NCBI-ProteinID:
XP_071087043
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MTLELFVRKTLDLLNKEREAEVEETRVLTEKLPPKELQRRGVCLLKLRLAGRNSGLYGRT
LVTFEPFWAGKDFPSHNLTPGDIIGLTLSQGETQNEALASGIVSKVGQSQISIAFDETHD
IFSLDDEVQYKLTKLANDVTYRRLKRALNDLNNYSSGRASCLVNVLFGVSELSPPTDPTD
IKYVNESLDTSQREAVEFALRQRELSVIHGPPGTGKTTTVVEIILQAVRRGMKVVACAPS
NVAVDNLVERLSHHLQKILRIGHPARLLPHIQKYSLDAIVSGSDENKLVHDVRRDLDKAI
SKVKQTRNKGEKQGLREEMRHLRKELVRREETATREILRRADVVLVTLTSASNAGPLRLL
DEEHFDLVVIDECSQALEAACWMALLRAPRCVLAGDHHQLPPTILSHEAARGGLELTLME
RVLKEQGEEVVRMLTTQYRMNENIMQWSSDQLYNGRLIAHDSVKTHLLRDLPGVSDCEET
SCPLLLVDTAGCDLSELELPEEVSKGNEGEADIVASHVEKLISSGLQPENIAVIAPYNLQ
VELLRVRLSPTYPKLEIKSVDGFQGREKEAVVISFVRSNSKGEVGFLSENRRINVAITRA
RRHVAVICDTETVSHDKFLKTLVEYFTERGEVWSAQEYIQDGKVTHTSSRPEQLENLLSV
KSSTKQKSASKGEGHKQRKGDKGHQKQVKKPGQRSNEGGARPKQPASDEGAVRDVEEKEA
EYVKYLEDFLANPDQTYLDFPASLNSHDRLVVHQLSEKLGLLHNSKGEGKDRHIVVSKPG
IEGQEVKVVTSATTGQGHKPDVKVKTKSNRKEQKNTHNKENKQINDSSVIPDGIETDTPE
EVPCGTNGEHVEKKSDKVTCEICGKEVLNANIQLHSVHCARQVKAKLTQGQGQPSKDEVK
SKKKTKNTKQDAALHRTASALEKIDDDDFDSLIATVQKLDNRCCFTKCKQFTTTLGHTCD
FCLRRFCLAHHIPEIHGCGADAKVAARQAMVKEGILFRGNVAPQRKLDPNKRAGLQRKLD
KKLDDMAGKRSSKTSKK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagagctttttgttagaaaaactcttgatttgttgaataaggagagagaagca
gaagttgaagaaaccagggtgctaacggagaaactaccacccaaagaattacagagacga
ggagtgtgtttgctgaaacttcgtttagctggaagaaattcaggtctctatggaagaaca
ttagtgacctttgaacctttctgggctggaaaagatttcccttcacacaatctcacccca
ggtgatatcatcggtctgactttatcacagggagaaactcagaatgaagcactggcttct
ggtattgtgtcaaaggtcggacagtcacaaataagcattgcttttgatgagacacatgac
atcttcagtcttgatgatgaagtccagtacaagctcaccaagcttgccaatgatgtgacc
tacaggcgcctcaagagagcactgaatgacctgaacaactactccagtggccgagcgtcc
tgtcttgtcaatgttctgtttggcgtttcagagttgtctccccctactgacccaacagac
atcaagtatgtgaatgagtccttggatacctctcagagagaggctgtagagtttgcactg
cgacagcgtgagctgtctgtgatccatggtccccctggtacggggaagacgaccacggtg
gtggagatcatcctccaggctgtcaggaggggcatgaaggtggtggcgtgtgctccgtct
aacgttgctgtcgacaacctggtcgagcgtctgtcccatcatctacaaaagattttgagg
atcggccaccctgcccgtctgctcccgcatattcagaagtactccctcgatgccatcgtc
tctggaagtgacgagaataaactggtgcacgatgttcggcgagaccttgacaaggccatt
tctaaagtgaagcagacgcgcaacaagggagagaagcagggtttgcgggaggagatgcga
catctccgcaaggagctggtccggagggaggagacggccaccagggagatactacgacgt
gctgatgttgtcttggtgacactgactagtgcctctaatgccggacctctgagacttctg
gatgaggaacactttgacctggttgtcatcgacgaatgttcccaggcacttgaggctgcg
tgttggatggccctgctccgagctcctcgctgcgtgttggctggggatcaccatcagctg
cctcccactatactctcccatgaggcagcaaggggtggcctagagctgacgctgatggag
cgagtgttgaaggagcagggggaggaggtggtgaggatgctgacaacgcagtaccgcatg
aacgagaacatcatgcagtggtcctccgaccagttatacaatggtcgacttattgctcac
gactccgtcaagacacatctgctgagagacctgcctggtgtgagtgactgtgaggaaacc
agttgtcccctgctgctggtggatacagccggttgtgacctgtctgaactggaattacct
gaagaagtgtccaagggaaatgaaggtgaagctgatattgtggcctcccatgttgagaag
ttaatctctagtggtctacaacctgagaatattgcagttattgccccttataaccttcag
gtggagctgctgcgtgtgagactgtcgccaacctaccctaaactggagatcaagtccgta
gacggcttccaggggagggagaaggaagctgtagtcatctccttcgtcagaagtaattca
aagggtgaagttggcttcctgtccgagaatcgtagaataaatgtggccatcactcgagca
cggcgccatgtcgcagtgatctgtgacactgagacggtcagccatgacaaattcctcaag
accctggtggagtacttcacagagaggggcgaagtctggtcagcccaggaatacattcaa
gatggcaaggtcacccacacaagttcacgtcctgaacaactggagaatctgttatctgtc
aagtcttccaccaagcagaaatctgccagcaaaggtgaaggtcacaaacagcgtaaaggt
gacaagggtcaccagaagcaggtgaagaaaccaggtcaaaggtcaaatgaagggggagct
agaccaaagcaaccagcttctgatgagggtgctgtgcgagatgtggaagagaaggaggcg
gagtatgtcaagtacctcgaggacttcctagccaaccctgaccagacgtacctcgacttc
ccagcgtctctcaactcccatgacaggctggttgtacaccagttatcggagaagcttggc
ctactccacaacagtaaaggagaagggaaagacaggcacattgtcgtatccaaacctgga
attgaaggtcaggaagtcaaggttgtgacctctgcgacaacaggtcaaggtcataaacct
gatgtcaaggtcaaaactaagtcaaacagaaaggaacagaagaatacacacaataaggaa
aacaaacagattaatgacagcagtgtaatacctgatggtatagagacagatacaccagag
gaggttccttgtgggactaatggtgaacatgttgaaaagaaaagtgataaagtaacttgt
gaaatatgtggtaaggaggtcctgaatgcaaacatccaactgcattctgttcattgtgct
agacaggtcaaggccaaactaactcaaggtcaaggccagccatcaaaagatgaggtcaaa
tctaagaaaaagacaaaaaacacaaaacaggatgcagctttacaccgaaccgcatctgcc
ctagaaaaaattgatgacgatgattttgacagtttgatagcaaccgtacagaaacttgac
aataggtgctgctttacaaaatgtaaacagttcaccacaaccctgggtcatacgtgtgac
ttctgtttgagaaggttctgcctggcccaccacattccagagatccatggatgcggagca
gatgccaaggtagcggccaggcaggccatggtgaaggaaggaatcctctttcgggggaat
gttgcaccacagagaaaactggaccctaacaagcgagctggcctgcagagaaagttggac
aagaaactggacgacatggcaggaaagcgttcatcaaagacgagcaagaagtga
DBGET
integrated database retrieval system
