Haliotis cracherodii (black abalone): 139449568
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Entry
139449568 CDS
T10814
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcra03009
]
139449568
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139449568
Ribosome biogenesis [BR:
hcra03009
]
Eukaryotic type
Pre-60S particles
Helicases
139449568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
RIC1
Motif
Other DBs
NCBI-GeneID:
139449568
NCBI-ProteinID:
XP_071087121
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MDVKWTSLSSVLGKETLNAIKALKFKRMTPVQAACIPQFLRNKDVAVEAVTGSGKTLAFL
LPLLEILKKRETPLKKNEVGAVILTPTRELAIQIDEVLSHFLRYFSDFSSVLFIGGANVG
GNIDKFLTHGGNIVIATPGRMEDMFQRKQGAFNLAASVKALEVLVLDEADRLLDMGFTAS
INTILSYLPKQRRTGLFSATQTDEVENLIRAGLRNPLRITVKEKLSTESESLQRTPLTLQ
NYYMIVDADEKFNQLLHFLKEHKQEKVMVFFSTCAGVDYFSQALQHILKKSQILSIHGKM
KQKRNKIFSNFRQLASGVLTCTDVMARGVDIPEVHWVIQFDPPSSASSFVHRCGRTARIG
NAGNALVMLLPAEDTYTNFISINQKVPMEELEKAEDVHNHLPAVQKLAAKDRAIYEKGMR
AYVSFVQSYAKHECSMIFRVKDLDFGKLATGFGLLKIPKMPELKGKVVPNFLPMEVNVDD
IPFRDKHREKQRQVRIESGELLQRHKKMKRPPKSVPWSRQKEKVEKKKKRVEKKLRAQKR
KLEEVEPANTAEEVDDLGSDLLLMKKLKKGKISKNEFNQEFAGSALNKLDSDSECDT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaagtggacctcgctgtctagtgttttaggcaaggaaacactaaatgctatt
aaagctctcaagttcaaacggatgacaccagttcaggcagcatgtatcccacagtttctg
cggaacaaagatgtcgccgtggaagcagtcacaggaagtgggaagaccctcgcctttctt
ctcccgcttctggaaattttgaagaaaagagagactcccctgaagaaaaacgaggtgggc
gcagtgatcctgaccccgacacgagaactggccatacagattgacgaggtcctctcccac
ttcctccgttacttctcggacttctcctcagtactcttcatagggggcgctaatgtcggg
ggtaatatcgacaagttcctcacacatggaggaaatattgtgatagcaacgccgggccgg
atggaagacatgttccagaggaagcaaggagcgtttaacctggcggccagcgtcaaggcc
ttggaggtgctcgtcctggatgaagctgaccgattgctggacatgggatttacagcaagc
atcaacactatcctgagttacctccccaaacagcggcggacgggtctgttctcggccacc
cagacagatgaggtggagaatctgatccgggcagggctgaggaaccccttgaggatcaca
gtcaaggagaagttgtcgacggagtcggagtcgctgcagaggacgccactgacacttcag
aactactacatgatcgtggatgctgatgagaagttcaaccagttgctccacttcctcaag
gaacacaagcaggagaaggtgatggtgttcttcagcacatgtgccggagtggactacttc
tcccaggccctccaacacattctaaagaagagtcagattctgtctatccatgggaaaatg
aaacagaaaagaaacaagatattttccaattttcgacagcttgccagtggtgtgttgacc
tgtaccgatgtgatggctcgcggggtggacattcctgaagtacactgggtcatacagttt
gaccccccgagttcagccagttcttttgttcatcgatgtggtcgcacagctaggatcggg
aacgccggcaatgcccttgtgatgctgctccctgctgaagacacctacaccaacttcatc
agcatcaaccagaaggtgccaatggaggagctggagaaggcagaggatgtacacaaccac
ctgccagcggtacagaagctggctgccaaggacagggcaatatacgagaaggggatgaga
gcctatgtgtcgtttgtccagtcctatgctaaacatgagtgcagcatgatattcagggtg
aaagatcttgacttcgggaaactagctactggattcggtcttctgaaaattcctaaaatg
cccgaattgaaaggcaaagtggttcccaactttctacctatggaggttaatgtggacgac
attccattcagagacaagcatcgggagaagcagcggcaggtgaggattgagagcggggag
ctgctgcagaggcataaaaagatgaagaggccacccaaatcagtgccgtggtcccggcag
aaggagaaagtggagaagaaaaagaagagagtggagaagaaactccgtgcacagaagagg
aaactggaggaagttgaacctgctaacacagctgaggaggttgatgacctcggttcagat
ttgctgctcatgaagaagctaaagaaagggaaaatatcgaagaatgaattcaaccaggaa
tttgctggaagtgcattaaacaagttggacagtgattcagagtgtgacacgtga
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