Haliotis cracherodii (black abalone): 139449579
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Entry
139449579 CDS
T10814
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139449579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139449579
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139449579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
139449579
NCBI-ProteinID:
XP_071087139
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAEVAAVPAPGAAPAEDDETWLYGDENKEQKDPEKDGQKKKKKSDGDGSEKPEDKEEGEM
SGEEEAQAKNDDDDSDDDDNVQVTIGDIKQWTVTETPRNLFKSGSGYQKPAAGVAGAQKT
VVPGKGMDLEAQGTVNGVPTFEFDIDSLSAEDKPWRNPGADITDYFNYGFNEDTWQQYCE
KQRRLRLENGVPLLGNKSQSRDSHSHHSHLGSGQPISRLGDKDSGQTGSSIPTTSSLRKA
QPPPNRKMGGTIDVIGSTVHDSRRPGQGPTPSSIPVTGVTPDYRKFQPPSVPPPGMPPMM
PDYSMPPPGMPPPLGLPPPGVPPPPGVAVPLPTPYGSEQYDPFSHPPPGFNYESNTFTPS
YTEGHHQNFQSYDDRWKYNSDRHARDRSPDQEFGRENYWRDRERDRDRERDRGDRERDRD
SYRERDRGRERERDRDRDKRRSRSTDRDDSRHRDDKHRTRRKHRDDEDDHHRSKHRKSKK
RRDKDEEGGDSVTTADEGDKGE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagttgcggcagtaccggcgccgggagctgcaccggcagaagacgatgaaaca
tggctttatggtgatgaaaacaaagaacagaaagatcctgagaaggatggccagaagaag
aaaaagaaaagtgatggagatgggtccgagaaaccagaagacaaggaagaaggggagatg
agtggtgaggaagaagcacaggcaaagaatgatgatgacgattccgatgatgatgacaat
gtccaagtcaccattggcgacatcaaacagtggaccgtcacagaaactccccggaacctg
tttaagagtggcagcggctaccaaaagcctgcagcaggagtggcaggagcacagaagacc
gtggtgccggggaaagggatggatctggaagcccaggggacagtcaatggagtcccaacg
tttgagtttgatattgacagtctctcagctgaagacaaaccctggagaaaccctggtgct
gacataactgactacttcaactacggcttcaacgaggatacctggcagcagtactgcgag
aaacagcgtcgactacgtctggagaacggcgtgcccctcctcggcaacaagtcacagtcc
agggacagccactcccaccactctcaccttggctctggtcaacccatcagtcgtctcggg
gacaaggactcgggacagactggatccagcatacctacaacaagttcactaagaaaagct
cagccacccccaaacagaaaaatgggaggtaccattgacgtgattggtagcacagtccac
gattcccgacgcccaggtcaaggacccacacccagctccatacctgtcacaggggtcact
ccagactatcgcaagttccagcccccatcagtacctccaccaggcatgccaccaatgatg
cccgactactccatgcccccacccgggatgccgccacccctggggctgcccccaccaggc
gtgcccccaccgccaggtgtcgctgtacctctcccgacaccctatgggtccgagcagtat
gatcccttcagccacccccctccaggcttcaactacgagagcaacaccttcactccaagt
tacactgaaggccatcaccagaacttccaaagctatgatgaccgatggaagtacaattct
gaccgacacgcacgagaccggagtccagaccaagagtttggaagggaaaattattggcga
gaccgtgagcgagaccgggaccgagagagagaccgtggcgacagagaacgggatcgagat
tcttatcgtgaaagagataggggtagggagcgggagcgggaccgagatagagacaagagg
aggtcaaggtcaactgatagagatgattctcgtcatagagacgataagcacagaacacga
aggaagcaccgagatgacgaggatgaccaccatcgatccaaacacaggaagagcaagaag
cgaagagacaaagatgaggaaggcggagactccgtgactacagccgatgaaggggataaa
ggggaatga
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