Haliotis cracherodii (black abalone): 139449797
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Entry
139449797 CDS
T10814
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139449797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139449797
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139449797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
ANAPC8
TPR_19
TPR_12
Motif
Other DBs
NCBI-GeneID:
139449797
NCBI-ProteinID:
XP_071087434
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MADSKSEDIPEVVESLPSLPTVTEQQRELGCQALREFENQQFGPCVSTLNKLLKERSSDV
KVSQNKAVAEFYHSGLKNVEEFRKKMNCFSINPDAFDSLEDMDHAFVYYNQAVVLYHLRQ
YRASLSLLDKLFQCIEPLEELLARKVILLLVELYLCTYQPEKSMGMLSYMEKTYFNGKHG
AGQGTPEKPEKGKDNKESSENSVEAWRPRISVYKIRCLIMLKSMKMCKRELKSLLNTQAM
NTSVIYLKSNFEYLRGNLRKAIRMLGSDPQAQVFTNTGESLPMMYFNNLGCIHFHLRKHH
LGAFYFRRAVQENENALKDAASGGQNRPLQTRGMSRHYELLYNMGIQLLHCGQPQAAFDC
LIEAVQVYQVNPRLWLRLAECCIQANRENNDEDRCLEKRLEVIQGSVGSGVHRKLILGSG
ISKFKPSSTTPSMPSATLEFASLCLRNAMLLLPEDPLQADKASTSSDDHEGRPTPEPVLM
AAPPGNPMKATEIAHLRCSILAASSYTCLCLNDHLMALHHAENLLKQPHLSGAQRYIGHL
YVAEAQVQLDKIPDSIEHLNPDLVTDIGTCPPEHKSDQDRADKNDKGEKDLLADSTEAKS
SLYPWFPKDLSRAKAVMQYNLSAAHAMRGEYDKAMTHLTESSRNIGTPLPAQMYFLKLYL
DLMEGRRKMAQQVIKDHFGHVTPNRI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcaaagtctgaagacatcccagaagtagttgagagtttaccatctcttccg
acagtgacagaacagcagagagagctggggtgtcaagccctgagagagtttgaaaaccaa
cagtttggaccatgtgtctcaacacttaataaactactaaaggagcgatcatccgatgtc
aaagtgtcccaaaacaaagcagtggctgagttctatcacagcggcttaaaaaatgtggag
gagtttagaaagaaaatgaattgtttctccatcaaccctgatgcgtttgacagcctggaa
gatatggaccatgccttcgtctactacaaccaggctgtggtgctgtaccatctccgacag
taccgtgcatcgctcagtctcctggataagttatttcagtgtatcgaacctttggaagaa
ctcctagccagaaaggttattttgctgttagtggagctgtatctgtgtacatatcagcca
gagaagtctatgggcatgttgagctacatggagaagacgtattttaatggtaaacacggc
gccggacagggcacaccggagaagccagagaaggggaaggacaataaggaaagctccgag
aactccgtggaggcgtggagacctcggatcagtgtttacaagattcgctgcctgatcatg
ctcaagtcaatgaagatgtgcaagcgggaactcaagtctttactcaacactcaggcaatg
aacacatctgtgatctacctgaagagtaactttgagtacctacgggggaacctacggaag
gctatccggatgctgggctctgacccccaggcccaggtgttcaccaacacgggggagagc
ctccccatgatgtacttcaacaacctggggtgtatacacttccacctccgcaaacaccac
ctcggggccttctacttccgcagagctgtgcaggagaacgagaatgctttgaaagatgct
gcatccggaggccaaaatcgccccctacagacgcgtggcatgagtcggcactatgagctg
ctatacaacatgggaatacaactgctccactgcggccagccccaggctgccttcgactgc
ctcatagaggcggtacaggtgtaccaggtgaacccccgactgtggctgcgactcgcggag
tgttgcatacaagccaacagagagaacaatgatgaagatcgttgtttagagaagcgacta
gaggtgattcaaggctcagtcggaagtggagtacacagaaaacttatcctcggaagtggc
atcagcaagttcaaacctagttcgaccacgccctccatgccatctgccaccctggagttc
gcctcactgtgtctgcggaatgctatgctactactgccagaagaccccctgcaggcagac
aaggcctctacatcctccgacgaccatgaaggaagacccaccccggaaccagttctgatg
gcagcccctcccggcaacccgatgaaagccacagaaatcgcccacctacgttgctccatc
ctcgctgcatcctcatacacctgtctgtgtctcaatgaccacctaatggccctacatcac
gcagaaaacctcctcaaacagccacatctctcgggcgctcagaggtacattggtcacctg
tatgtagccgaggcccaggtgcagctggacaagatacctgattccatcgaacatctgaac
cctgacctggtcacagacatcgggacatgtccaccggaacacaagtctgatcaggacaga
gctgacaaaaatgacaaaggagagaaagacctactagcagacagcacagaagcaaaaagt
tctttgtatccatggttcccaaaagatttgtctcgtgccaaagcagtgatgcagtacaac
ttatcagccgctcatgcgatgaggggggagtatgacaaggccatgacacatctcacagag
agttcgcggaacatcggcacgcccctcccagcacagatgtacttcctcaagctatacctg
gacctgatggagggtcggaggaagatggcccagcaggtcatcaaggaccacttcggtcac
gtcacccccaacagaatctag
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