Haliotis cracherodii (black abalone): 139450010
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Entry
139450010 CDS
T10814
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03440
Homologous recombination
hcra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139450010
03450 Non-homologous end-joining
139450010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcra03032
]
139450010
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139450010
DNA replication proteins [BR:
hcra03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
139450010
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
139450010
BRCA1-C complex
139450010
NHEJ (non-homologous end-joining)
MRX complex
139450010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
BLOC1_2
AAA_13
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
139450010
NCBI-ProteinID:
XP_071087725
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSTIEKMSVQGVRSFGPDDPNKQVITFFKPLTLILGPNGTGKTTVIECLKYMTTGDMPPG
SKGGAFIHDPKVAHEREVKGQIRLLMRDMTGQRCSIQRSITATQKVKKIETRTLDGVISR
WGPDGQKKSITSRCAELDKEMVTALGVSKAVLDNVIFCHQEESNWPLCEGKALKEKFDAI
FASTRYTKVLETIRKLKQEQDGSIKLYKQDLKYLKDHKDKAAQLQSDLEELSGKAAASKE
SVAKITEQLGPIEERLDQIHQNANEIYKVKTKIEKLESEKGQLEKNIQELQDNIEHVFQG
STEELKRVLEDFEDKLQERKDTVQQMERRKEELSVSVEKLGREKSQLQLEVGKLQQEAQT
HKENVEKRDNLIRTLAAQYEFEGFERGQISDEKYKYFFENVRSKLEGMVADTRELKTQYE
EKEASIQKKMDDLRDSKTKLEQSERIKRDLMTKNSNEIRQINQKLSHMEASAGRLDQLTR
DLKGAELDLSSTEGTVNLEDLKREITLLDKDRRQLDTTLSDLNSEMNRLNRELETQTQLD
MLKKERTSKEDIIRRLKAKHEDGLTYLLGHMPTTNIRGQLEDFIGQQTEQVKQCSTEVQK
AKTDLSSKEAEKNMLGRQIKDSEQKLTGLEEKIFDVCGSQDFDDGLKSVQSKMAQAQDKR
GSLLGAEHFFKKYQDDLKKDSPCCPLCHREFATDQEVRELILELQDKLRLVPTHLTKAEK
DLDDFQLKYDNMTQLKPLRENIVTLRDEEIPQLKNKQRRLNEEIQKLRDLVQNKEDELQA
KETDEVTGKSMQPDIVMMDRYYGEIRELDKKIATHSSMLSGGDSGRTLETVIGEKEDKQM
QLDTINRKLDHKRQKMSDHSEHVQKLRSKVNTLKEEKLKIDSELQQQTKLEETKAGLSTD
NKMHEQDIQEARTQIRPLEEQIERQCREKKKLVATKDDKIDGAKAEIECVRSEAKQVKDI
NSDIKQYNQSMKADRLEKSRERMSDIADKETGVNKEREEITENVNKLSKDLATQQIRERE
LMDNLQLRQKQKEVGRQEREIGVLQDQMGDFDTANLERERRKLLQKADEMQKERNMCQGR
QQGLDDMIRNTKRELQTDMFKDAGSKYRDMMIQMRTTELANSDLEKYYRAMDKAIMNYHV
QKMEEINKIIRELWRNTYRGNDIETIEIRSDDEDSGALKSRRVYHYRVVMIKGDTALDMR
GRCSAGQKVLASLIIRLALAETFCVNCGILALDEPTTNLDRENIESLAYALVSIIKARSC
QSNFQLVLITHDEDFVELLGRSEYVEDFYRISKDESGYSCITKSKVENLHRG
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccatagagaaaatgagcgttcagggggtgcgaagcttcggtccagacgatcct
aacaagcaggtcatcacattcttcaagcccctgactctcatcctcggccctaatggtaca
gggaaaactactgtgatcgagtgtctgaagtacatgacgacaggtgacatgccccccggc
agcaagggaggagccttcatccatgaccccaaggttgcccacgagcgggaagtgaaaggt
cagatccgcctcttaatgagagacatgaccggtcagcggtgtagcatccagaggtccatc
acagccacacagaaggtgaaaaagattgagacgcggacactagatggagtgatctcgaga
tggggacctgatggacagaagaagagtatcacttccaggtgtgccgaactggacaaggag
atggtgacggcactgggtgtgtccaaggccgtgctggacaacgtcatcttctgccaccag
gaggagtccaactggccactgtgtgagggtaaggccttgaaggaaaagtttgacgccatc
ttcgcctcgaccagatacaccaaggtgctcgagaccattcggaaactcaaacaggaacag
gacggaagcatcaagctgtacaagcaggacctcaagtacctgaaggaccacaaggacaag
gcagctcagctgcagtccgacctggaggaactcagtggcaaggcggcagcatcgaaagag
tccgtggccaagataaccgagcagctcggcccgatagaggagcgtcttgatcaaatacac
cagaatgctaatgagatctacaaagtgaagactaagattgagaaactggagagtgaaaag
ggacaactggagaaaaacattcaggaactccaggacaacattgaacatgtgtttcagggg
tccacagaggagctgaagcgggtcctggaggactttgaggacaagcttcaggagaggaag
gacactgtgcagcagatggagcggcggaaggaggagctgtcagtgtcggtggaaaagctg
ggcagggagaagtcacagctgcagctggaggtgggcaagctgcagcaggaggcccagact
cacaaagagaatgttgagaagcgggataacctgatccgcaccctggctgcccagtacgag
tttgaagggtttgagagagggcaaatctcggatgagaaatataaatacttctttgaaaat
gtcagaagcaaactggagggaatggttgctgacactcgagagttgaagacacaatatgag
gagaaggaagcctccattcaaaagaagatggacgacctgcgggacagcaagaccaagctg
gagcagagtgagcgcatcaagagggacctcatgaccaagaactcaaacgagatccgacag
attaaccagaagttgagccacatggaggcctcggccgggcgacttgaccagctgaccagg
gacttgaagggggcagagctagacctgagcagcacagaggggacagtcaacctggaagat
ctgaagagggagataactcttcttgacaaggacagacgacagctggacacaactctcagt
gatttgaactcggagatgaatcgtctgaaccgggagctggagacccagacccagctggac
atgctgaagaaggagaggacatccaaggaggacatcatccggcgactgaaggctaaacac
gaggacggcctgacctaccttttgggccacatgccgacgaccaacatccgtggacagctc
gaggactttatagggcagcagacggagcaggtgaagcagtgttccactgaggtgcagaag
gccaagaccgatctctcctccaaggaggccgagaagaacatgctggggaggcagatcaag
gatagtgaacaaaagctgacagggcttgaagagaagatatttgatgtgtgcggcagccag
gacttcgatgatggactcaagtccgtacagtccaagatggcacaggcgcaagataaacgt
ggctcccttctcggtgcggaacatttctttaagaagtatcaggatgacctgaagaaagac
agtccctgttgtcccctgtgtcaccgagagtttgccaccgatcaggaggtccgggaactg
atcctagagctccaagacaagctacgcctcgtgccgactcacctgacaaaggcagagaaa
gaccttgacgacttccagctcaagtacgacaacatgacacagctcaagcccctccgggaa
aatatcgtgaccttgagggatgaagagattccacaactgaagaacaaacagcgccgcctg
aacgaggagatacagaaactccgggatctggtgcagaataaggaagatgagctacaggcc
aaggaaacagacgaggtcaccgggaaaagcatgcagccagacatcgtcatgatggatcgc
tactatggcgagattcgagaactggacaagaagatcgccacacacagttccatgctgtct
ggaggagactctggacggaccctggagactgtgattggggagaaagaagacaagcagatg
cagttagacaccatcaatcgcaagctggatcataaacgacagaaaatgagtgaccactct
gagcatgtgcagaagctgaggtcaaaggtgaacacgctgaaggaagagaagctgaagatt
gacagcgagttgcagcagcagaccaagttggaggagacgaaggcggggctgagcacggac
aacaagatgcatgaacaagacatccaggaagccagaacacagataagaccactggaggag
cagatcgagcgtcagtgccgggagaagaaaaagcttgtggctaccaaggacgacaagatt
gacggagccaaggcggagattgagtgtgtgcgatcggaggcgaaacaggtgaaggacatc
aacagtgacatcaagcagtacaaccagtccatgaaggcagacagacttgagaagagtcga
gagcggatgtcggacatcgcggacaaggagacaggtgtgaacaaggaacgggaggagatc
accgagaacgtcaacaagctcagtaaggacctggccactcagcagatccgagagcgcgag
ttaatggacaacctccagctacgtcagaaacagaaggaggtcggtcgccaggagcgcgag
atcggcgtcctgcaagaccagatgggtgactttgacaccgccaatctggagagggaaagg
aggaagctgctgcagaaggctgatgagatgcagaaagagcgcaacatgtgccaaggtcgc
cagcagggtctcgacgatatgatccgcaacacgaagagggagctccagacggacatgttc
aaggatgctggctccaagtaccgggacatgatgatccagatgaggacaactgagttggcc
aatagtgacttggagaaatactacagagctatggacaaggccatcatgaactatcatgtc
cagaagatggaggagatcaacaagatcatccgtgaactgtggaggaacacctaccgcggg
aacgatattgaaacaattgagattcgttctgatgatgaggacagtggtgccctgaagtcc
cgtcgcgtctaccactaccgtgtggtgatgatcaagggtgacactgctttagacatgaga
ggacgatgcagcgccggacagaaggtgttggcgtccctgatcatccgtctggcgttggcg
gaaacgttttgtgtcaactgtggaattctggccctggatgaacctacaaccaacctggat
agggagaacatagaaagtctggcttatgctctagtctcgataatcaaggctcgatcctgc
cagagcaactttcagctagtgctgatcacccatgacgaagactttgtggaactccttggg
cggtcagagtatgtggaagacttttataggatcagcaaagatgagtcagggtattcctgc
atcacaaagtcaaaggtagagaatctacatcgaggttaa
DBGET
integrated database retrieval system
