Haliotis cracherodii (black abalone): 139450035
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Entry
139450035 CDS
T10814
Name
(RefSeq) protocadherin gamma-A3-like
KO
K16498
protocadherin delta 1
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139450035
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcra01009
]
139450035
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcra04515
]
139450035
Protein phosphatases and associated proteins [BR:
hcra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139450035
Cell adhesion molecules [BR:
hcra04515
]
Cadherins
Protocadherins
139450035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
LST1
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
139450035
NCBI-ProteinID:
XP_071087765
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSNSIIRGVLLLTSVQLTLSITLTYSIDEQKPAGSILGNIAYDANLRDYVSEEEFHRLRY
SFLTQGNPHTSNFSIDSTTGNFTTARELDRETLCNFLNTCKLTFEAVAQSNLGSFFKKIQ
LEVNVNDINDNSPEFMTSTYVLQISEGANTGSNFPLISAVDRDTGVNNSVKSYDLQPKDS
PFVLITTAGVTGIMSISLELVQKLDRETTGFYQLFVHARDGGSPQRTGTLTLHISVSDIN
DNPPVFDSTRYTLNISETTAANSVILRLSATDTDAGNNANISYHFMPRQPESVLNLFHLG
HNTGELRTAGSLEYEAGKTHQVIVEARDNGVPSKTAQAVVVVTIIDTHNDAPELYINVFH
DSGIAEISEFSEIGRVVAHIAVEDPDSGSNGNVQCSMPNSSFELRGLDKNEFKVILVNAL
DRETVPFHNVSVVCHDGGSPPLSVQENFLVRVIDENDHAPKFPEDVYYANIVENRNIGAS
VMTLTATDADNGTNAQLIYKVQDDHGNRFSIFNNGTLVTAMEFDREEYPEVIAKILAVDQ
GNPAMTATTTVIITVDDVNDQAPVFDMSKFQLFVPEESPSYTSVGQITASDADLDENAII
MYQLHGSTRSDFPFIVYADGVIKTNRILDRETKDHYEFVVVATDLGQPPMSSTARVVVTL
EDINDHTPVIIFPTQANNTVTMPHTQRIESPVIEITAVDMDVERNAEVSYFIEGGNGSAV
FIIDHKTGIVRLRKQLESKHISTVYSLMVVAQDHGSPQRATQSELFIEVILGNATLSISN
QGSINIITAMVLVGVTILLAVIVVATICLLRSSDKKKRLYRAKAEEEKVISSMRRQGSSI
SSSSKNSTTPLAEKDGEKKEKEVSFSLDEENNVSLSSGSVGFNARNNECLFTIPEDTEND
NKKQHKSKQQKFSTFKDDNEKNHTHIRFHDDSGSDLSGDVSISDSGRGGSDIELQSHGGS
SNVLESDMSFSGHPRHPKNLVDHQSASPAASFSTFYGSDAHGTSYDNSSLSSSVQSKQIP
DNHLHNGAVPYRARANNSAPATQRLSIPPRMKNNPHPNHGLPPRGNYSASYGQLSQNGGR
HRGPKDAGTYVHLKHPTIEGEYMDMNGHKMSRMHHIDDTVSEMNTSAWDNDTTTSGSYTV
DPEELCDEIDRLFFKENINKDVIV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagtatcatccgaggcgttcttctgctgaccagcgttcagttgacactctcc
attaccctcacatacagcattgatgaacaaaaacctgcaggaagcatcctggggaacatt
gcctacgatgccaacctccgagactatgttagcgaggaggagtttcatcgacttcgatac
agcttcctgacccaaggcaatccccacacctccaacttctccatcgacagcacaacagga
aactttaccacagctcgagaacttgatagagagactttgtgtaatttcctcaacacttgc
aaacttacctttgaagctgttgcacaatcaaatcttggttccttcttcaagaagatccag
ctggaggttaacgtgaatgacattaatgacaattctccagagttcatgacatcaacttat
gttctgcagatttctgaaggagccaacactggttctaacttcccactgatcagcgcagtg
gacagagacactggtgttaataattctgtgaagagctatgatcttcaaccaaaggacagt
ccgtttgtactcatcactactgcaggagtgacgggcatcatgtctatctcactggagctt
gtgcagaaacttgacagggaaacaaccggcttttaccaactttttgtccatgcacgtgat
ggtggatcaccccagagaactggaaccctcaccctccacatcagtgtctcggacatcaat
gacaacccccctgtgtttgacagtacccgatacaccttgaacatttccgagacgactgct
gctaacagtgtcatccttcgtctgtcagcaactgacactgatgctggcaacaatgctaac
atcagttaccacttcatgccccgacaacctgaaagtgtcctcaaccttttccaccttggc
cacaacactggagaactcagaacagctggatccttggagtatgaagctgggaagacgcat
caagtcattgtggaagctcgtgacaatggagttccttcaaagactgcacaagctgtagta
gttgtcaccattattgacactcacaacgatgcaccagagctgtacatcaatgtgtttcat
gacagtggcattgcagagatatctgaattttcagaaattggtcgtgttgttgctcatatt
gctgtggaagatccagactcaggttctaatggaaatgttcagtgctctatgccaaactcc
tcctttgagctccgcggccttgacaagaatgagttcaaggtcatccttgtgaatgctctt
gatcgtgaaactgttccctttcacaatgtgtctgttgtctgccatgatggtggctctcct
cctctctctgtccaggaaaacttcttagttagagtaatcgatgaaaatgaccatgcacct
aaatttccagaagatgtttattatgcaaatatcgttgagaacaggaacattggagcttct
gtcatgacactcactgctacagatgcagacaatggcaccaatgctcaactcatttacaaa
gttcaggatgatcatggtaacaggttcagcatcttcaacaatggaactctggtgacagca
atggagtttgaccgagaagaataccctgaagtgatagctaagatccttgctgttgaccaa
ggtaaccctgccatgactgctactaccacagtcatcatcactgttgatgatgtcaatgat
caagcccctgtcttcgacatgagtaaattccaactcttcgttcctgaagaatcacccagc
tataccagtgttgggcagatcactgcatctgatgcagatttagatgaaaatgcaatcatc
atgtaccagctccatgggtctacaagaagcgacttcccctttattgtgtatgctgatggt
gtaatcaagacgaaccgcatcctggacagagagaccaaagatcattatgaatttgttgta
gttgcaactgatcttggacaacccccaatgagcagcacggctagagttgtggtaaccttg
gaagacatcaatgaccacacacctgtcatcatcttcccaacccaggctaacaacacagtg
acgatgccacacacccagagaattgaatcccctgtcattgaaatcactgctgttgatatg
gacgtagaacgtaatgctgaagtttcctacttcattgaaggtggcaatgggagtgctgtg
ttcatcatcgaccacaagactggtatagtacgccttaggaaacagcttgagtccaaacac
atctccactgtctacagtctcatggttgttgctcaagatcatggttcaccccagagagct
acccagtcagagctcttcattgaagtcatattaggaaatgctactttatccatctccaac
caaggatccatcaacatcatcactgcaatggttctggttggtgtcaccatccttcttgct
gtcattgtcgtggcaaccatttgccttctcagaagttcagataagaagaagaggctgtac
cgagctaaggcagaggaagagaaggtcatctcaagcatgaggaggcagggaagcagcatc
tcctcctcatcaaaaaactccacaactcctctagctgagaaggatggagagaagaaggaa
aaggaggtcagcttctcattggatgaggaaaacaatgtctccctgtcatctggatctgtt
gggttcaacgctcgcaacaacgaatgtctcttcactatcccagaagacacagagaatgat
aacaagaaacaacacaagtcaaagcagcagaagttttctactttcaaagatgataacgag
aagaaccacacccacatccgtttccatgatgacagtggcagcgatctgtctggtgacgtc
agcatcagtgacagtggcagaggtggcagtgacattgaattacagagtcatgggggatcc
tccaatgttttggaatcagatatgtctttctctggtcatcctcgtcatccaaagaatctt
gttgatcaccaatcagcttctccagcagcgagtttctctacattctatggaagcgatgcc
catggaacaagctatgacaattcctcactgtccagttctgttcagtccaaacagattcct
gataatcatcttcataatggtgctgtcccttaccgggcaagggcaaataactctgcacct
gctacgcaaagactctcgatacctccgagaatgaaaaacaatccgcatccaaatcatggt
ctacctccacgaggtaactatagtgcttcttatggacagttatctcagaatgggggtaga
cacagaggaccaaaagacgcagggacatatgtgcatttaaaacatcccacgattgaagga
gagtacatggacatgaatggacataagatgtcacgcatgcatcatattgatgacactgtg
agtgaaatgaacacttccgcatgggataatgacacgacaacatccggcagctatactgtc
gatcccgaagaactctgtgatgaaattgatagattgtttttcaaggaaaatatcaataag
gatgttattgtgtag
DBGET
integrated database retrieval system
